Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2475 ATGAGTTCGTCGTCGTCGAACGGTGGTGTGCCGCCGGGGTTCCGGTTCCATCCGACGGACGAGGAGCTCCTTCATTACTACTTGAAGAAGAAGGTGTCCTTCCAGAAGTTTGATATGGAGGTCATTAGAGAAGTCGACTTGAACAAGATGGAGCCTTGGGATTTGCAAGAGAGGTGTAGAATAGGATCAACACCACAAAATGAGTGGTATTTCTTCAGTCACAAGGATAGGAAGTACCCAACCGGATCAAGGACAAATAGGGCAACAAATGCCGGATTTTGGAAGGCTACTGGGAGAGACAAGTGCATAAGGAACACCTTCAAGAAGATTGGAATGAGGAAAACCCTCGTCTTCTATAGAGGTCGAGCTCCCCATGGTCAAAAGACTGACTGGATCATGCATGAATATCGTCTCGAGGATTCTGACGATCCTCAAGCGAACTCCAATGAAGATGGGTGGGTGGTTTGTAGGGTGTTCAAGAAGAAAAACCTCTTCAAAATTGGCAATGAGGGTGGTTCCATCCACAACATCAATTCAGACCAACAACTCAACACCAATTCCTCAAGCATCAATCAATTGCCTCGCTCCTTCATGCATAGAGAAAGTCAGTACTTACTCCACCACCAACAAAACCCTAGAAACTCATCGCCCGGCAGCGTTGGATTCGAGCTCGATAAACCTAACCTTGCCCTTCACTACCCTCCTCATCACTTGCAAAACCCTCAATACTCCCTCTTCCAAGCCCAACAAGCACTTGTTCCGGCCCACAAGCCCATTGCTTATGACTACAATTCATATTCCTCAACCCTACCTTCTGACTCGTCCGTCGGTGCCATCGCGGCGAAACAACTCATGGGAAACCCTAGAGATTGCGATAGCAGTGGCGATCAGGGTTTGAGGTACCATGTCTCATCAGAGGTTGGCGCCGGTGCGTGTGAACCGGTACCGGGGAGTCAGGATCAGGGCGGAGATGATAATAATGATCAAGATCAAGGGATGAATGAGTGGGGTGTGCTTGATAGGCTTGTGACATCCCATCTTGGAAGTGAAGATCATTCCTCCTCCAAAGGAGTTAGATTTGAGGAAGCAAATAATGCACAATCTGTTCACCACATCAACCCCCTCTCATTGCGTGGAGAAATGGACTTTTGGGGCTAtgcaaaataa 1167 0.4781 MSSSSSNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMEVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNTFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLEDSDDPQANSNEDGWVVCRVFKKKNLFKIGNEGGSIHNINSDQQLNTNSSSINQLPRSFMHRESQYLLHHQQNPRNSSPGSVGFELDKPNLALHYPPHHLQNPQYSLFQAQQALVPAHKPIAYDYNSYSSTLPSDSSVGAIAAKQLMGNPRDCDSSGDQGLRYHVSSEVGAGACEPVPGSQDQGGDDNNDQDQGMNEWGVLDRLVTSHLGSEDHSSSKGVRFEEANNAQSVHHINPLSLRGEMDFWGYAK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2475 388 Pfam No apical meristem (NAM) protein 11 138 IPR003441 GO:0003677|GO:0006355
Sto7g2475 388 Gene3D NAC domain 19 166 IPR036093 GO:0003677|GO:0006355
Sto7g2475 388 SUPERFAMILY NAC domain 8 161 IPR036093 GO:0003677|GO:0006355
Sto7g2475 388 PANTHER PROTEIN BEARSKIN2-LIKE 4 349 IPR033519 -
Sto7g2475 388 ProSiteProfiles NAC domain profile. 10 161 IPR003441 GO:0003677|GO:0006355
Sto7g2475 388 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 349 - -
Sto7g2475 388 MobiDBLite consensus disorder prediction 309 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2475 Sto-Chr7 30214805 30218574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2475 4 385 NAC Transcription Factor Family AT1G33280 53.627 3.25e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g2475 NAM 5.1e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2475 - - adu:107477630 555.829