Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2469 atgactCCAGCTAATTTGGCAGGTCAGTTCGGAGACACCACATACACGAAGGTGTTCGTTGGAGGTTTGGCTTGGGAGACGCAGAAGGAAACCATGAAGAAGTATTTTGAGCAGTTTGGTGATATCTTGGAGGCTGTTGTTATCACTGACAAAGCCACTGGAAAATCCAAGGGCTATGGATTCGTAACTTTTCGGGAGCCGGAAGCGGCCATGAGAGCTTGTGTGGATGCGGCTCCGGTGATAGATGGAAGGAGGGCGAACTGCAACCTTGCTTCTTTGGGAGTCCAGAGATCTAAGCCTTCTACTCCAAAGCATGgaggcggaggaggaggaaggaACTTTAGAGTGATGGGTTCATTCCAAACAGGATTTGGAGGAGGTGGATCAACTTTTGCTTCTGCAGCAACACTTCCTCATTATGCTATTCAGCAAGGCACACCTTATAATGTCTATGGGTACTCTCCTTACTCACCAGATTACAGTTACCCTACGGGATACTATAGTGTGTATGGAGGAGCAACCCAGTACCCACTGTATGGAACCGGACCGGGAGGCATGATGACAGGAGCGGCGGCAGCAGCCACCGCAATTTACCCGTACCTACAGTTCGGAGAAGGGAGTGGTGGCACCGGAGCCGTGACTGGCGGTTATACGTCCGGGCAGGGCTACGGTGTGTACTACCCACCACATCTGTTTCAGTATTCTCCAATTACTTCATCTGCTGGGTATGCACAGCACTATGGTGCACCCATGTCTCTTGCACCTTCGCCCGCATTGCAATCAGGCGTGAAGATGGCTTTTCAAGCTCCAGTTCCTCACCGTTAG 825 0.4921 MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGDILEAVVITDKATGKSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGGGRNFRVMGSFQTGFGGGGSTFASAATLPHYAIQQGTPYNVYGYSPYSPDYSYPTGYYSVYGGATQYPLYGTGPGGMMTGAAAAATAIYPYLQFGEGSGGTGAVTGGYTSGQGYGVYYPPHLFQYSPITSSAGYAQHYGAPMSLAPSPALQSGVKMAFQAPVPHR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2469 274 Gene3D - 10 132 IPR012677 -
Sto7g2469 274 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Sto7g2469 274 SUPERFAMILY RNA-binding domain, RBD 12 121 IPR035979 GO:0003676
Sto7g2469 274 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Sto7g2469 274 CDD RRM_RBM24_RBM38_like 16 91 - -
Sto7g2469 274 PANTHER OS01G0876800 PROTEIN 1 269 - -
Sto7g2469 274 PANTHER BOULE-RELATED 1 269 IPR037366 GO:0003729
Sto7g2469 274 SMART rrm1_1 17 89 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2469 Sto-Chr7 30157013 30162990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2469 1 92 C2H2 Transcription Factor Family AT2G19380 38.043 5.46e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2469 - - zju:107405501 395.971