Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2464 ATGTCTCAACACAGTTCAAACTCTCCTACCTGTTGCTCGAGTCCGGATCATTTGGATTCAGCTTCAGCTGAGCTGAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATTTTCTTCACTTTCATACTGCTCTTTTTGTTCTATGTGTTCTACCTTCGACCACGAAGGGTCGATTGGTCGTCTCTTAGGATGAGGCCATTTGCTGAGGACAACAGTAGTGGCATCTCCAGGCCTGAATTGGGTTTGAAGAAAGAACTGAGGGAGATGCTGCCGATCATTGTATACAAGGAAAGCTTCTTTGTTAAAGATACACAATGCTCAGTATGCCTTTTGGATTACCAACCAGAGGAAAGGCTTCAACAGATACCTGCATGTGGCCATACATTTCACATGGGCTGCATTGATCTTTGGCTTGCCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCGCTACTACCCTCTGCTAAATCTTCAACTGGGACACCTAATATACAGAGGCCATCCAATCATGAAGAAACACCACCTGCGCAATTATCTGAATCAAGATCCACTAGAGATACCAGTGTTGTCCAGAATTGCTCGAGAGAGGTTGCAAGCAGCGCCCACTGCATTGATGTAGAAAGAGAAAATGCCGAAAGCAGTTAG 645 0.4605 MSQHSSNSPTCCSSPDHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRPFAEDNSSGISRPELGLKKELREMLPIIVYKESFFVKDTQCSVCLLDYQPEERLQQIPACGHTFHMGCIDLWLANHSTCPLCRLSLLPSAKSSTGTPNIQRPSNHEETPPAQLSESRSTRDTSVVQNCSREVASSAHCIDVERENAESS 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2464 214 MobiDBLite consensus disorder prediction 158 191 - -
Sto7g2464 214 Pfam Ring finger domain 105 148 IPR001841 -
Sto7g2464 214 SUPERFAMILY RING/U-box 90 154 - -
Sto7g2464 214 CDD RING-H2_EL5_like 105 148 - -
Sto7g2464 214 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 7 173 - -
Sto7g2464 214 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Sto7g2464 214 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 153 IPR013083 -
Sto7g2464 214 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 7 173 - -
Sto7g2464 214 SMART ring_2 106 147 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2464 Sto-Chr7 30112393 30115144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2464 20 213 C3H Transcription Factor Family AT4G10150 51.485 1.14e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2464 K19039 - gmx:100794211 240.35