Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2432 ATGGGTAGGCTAATATCCCTCTTCATCACTCTCTCTGTGTTTTCTTGTGCGCTCCTCCCATTAGCCACATCAAGAAAGTCAAGACCATGGTCCCCAAACGACGTCGCTCGGTGGTGCGCCCAAACCCCTCATCCCGAGCCCTGCAAGTACTACCTAACCCACACCCACCACCGCTTCCCTCGGCCCAAGCACAAGTCCCAGTTTCGAGCCCTGCTGGTCCAATTGGCCTTCGACGAGGCCCAACTCATGCAGGCCCAGGCCCATTCCTACGCGCGAGGTTGCGTCACGAAGAAGCAAAAAGCCGTCTTCTCCGACTGCTTGAAGCTCTACGACAACACGATCTTCCAGCTCAACCAGACTCTGTACGGCATCCGGAAGACGAAGCAGCCTAAACGACACCGTTGCTCCGTCCTCGACGCACAGACCTGGCTCAGCGCCGCCCTCACCAACATCCAGACCTGCCGGAACGGCGCCGCCGATCTCAACATCACCGACTCCGATTTCATCGCCGATTCCGGAATCAGCAGCGCGTGCCACAATGTGACGAAGATGATCAGCAATACTCTGGCGGGGGTTGTGGAGGCGGGAGAGGAGGCTGTTGGCGGCGGAGGCGACGGCGATAAAGGCGAATCTGGTGGTGGCTCAGGACGGGACGGGGCATTTCAGGACGGCATAGATGGTCTTCACTTCATTGCTCGTGACATCACCTTCGAAAACACGGCCGGGCCTCGCAAGGGACAAGCGGTGGCACTCCGATCAGCCTCCGACCTCTCGGTCTTCTACCGCTGCGCCATTGTTGGCTACCAAGACACCCTCATGGCTCATGCACAACGCCAATTTTACAAACAATGCTACATTTATGGCACCGTAGACATGATCTTCGGCAATGCTGCTGTTGTTTTTCAAAATTGCATGATTTACGCAAGAAGGCCCTTACCGGGCCAAGCAAACATGATCACGGCCCAAGGTCGAGGCGACCCATTTCAAAACACCGGCATCTCAATCCACAATTCCCAAATTCGGGCCGCACCGGACCTCAAGCCCGTTATGAACCAATTCGCGACCTACTTGGGCCGGCCCTGGCAGCAATACTCTAGGGTTGTGGTGATGAAGACGTACATAGAGAATTTGGTGAGCCCATTGGGCTGGTCTCCATGGGGGAATTCAAATTTTGCTTTGAATACACTGTACTTTGGAGAGTATAGGAACCTTGGGCCTGGTTCGTCCATTAATAATAGGGTTAAATGGCCCGGGTTTCATATCATAACAAGCCCAACTGAGGCATCAAGCTTCACTGTGAATAGCCTTCTTGCTGGTCGGACATGGTTGCCTTCAACTGAGATATGCAGAATTGGAACAGAAGAACAAAATGAATGGTACTTCTTTAGCCATAAAGACAAGAAATATCCGACAGGAACTCGGACAAATAGAGCTACAGCAGCAGGATTTTGGAAAGCCACAGGAAGAGACAAAGCCATATATTCAAAGCATGATCTCATTGGGATGAGAAAAACCCTAGTTTTCTACAAAGGAAGAGCCCCCAATGGTCAGAAATCGGATTGGATTATGCATGAGTATCGTCTTGAAACCGATGAAAATGGCACCCCGCAGGCAAAGCTTGATCTCCATCATCTTCCATTGATTCCTCACCAGCTTCCGACTCGTCACCATCTTTTCCAGCAGCTTCCCCTGCTCGATCATCAGACCCCGAAACTGCTTCAATCTTCGGTTTCTGcttccataaaccctaataatAACCCTATGACGCCCTTTGGACTCGATGTCATGAACCATGTCATGGAAGGTGCTACTCAAGATCAACAAAATTTCCAAGCTATGTATGGTAGTAGTGGCCAAGAACAAGTGGTTGAGGATGATCAAGTGACCGATTGGCGAGTGCTCGACAAGTTTGTGGCTTCACAACTTAGTCAAGAAGACGTGGTGGCGAATAAGGATCACAACAATAACTACTCATCCAACGATGCCGGCACGAGCAGCAACAGCAATATTTTTCAGACAATGGAAAATGTTGTTGGTAGTAATGTACAATTCAGATCTTCTTCATCACaattggaaaagcaagaaatgGTGCCTGAAAATGCCTCAACTTCAACCTCAAGTTGTCCAATTGATTTATGGAAATAg 2145 0.4965 MGRLISLFITLSVFSCALLPLATSRKSRPWSPNDVARWCAQTPHPEPCKYYLTHTHHRFPRPKHKSQFRALLVQLAFDEAQLMQAQAHSYARGCVTKKQKAVFSDCLKLYDNTIFQLNQTLYGIRKTKQPKRHRCSVLDAQTWLSAALTNIQTCRNGAADLNITDSDFIADSGISSACHNVTKMISNTLAGVVEAGEEAVGGGGDGDKGESGGGSGRDGAFQDGIDGLHFIARDITFENTAGPRKGQAVALRSASDLSVFYRCAIVGYQDTLMAHAQRQFYKQCYIYGTVDMIFGNAAVVFQNCMIYARRPLPGQANMITAQGRGDPFQNTGISIHNSQIRAAPDLKPVMNQFATYLGRPWQQYSRVVVMKTYIENLVSPLGWSPWGNSNFALNTLYFGEYRNLGPGSSINNRVKWPGFHIITSPTEASSFTVNSLLAGRTWLPSTEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQAKLDLHHLPLIPHQLPTRHHLFQQLPLLDHQTPKLLQSSVSASINPNNNPMTPFGLDVMNHVMEGATQDQQNFQAMYGSSGQEQVVEDDQVTDWRVLDKFVASQLSQEDVVANKDHNNNYSSNDAGTSSNSNIFQTMENVVGSNVQFRSSSSQLEKQEMVPENASTSTSSCPIDLWK 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2432 714 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Sto7g2432 714 SUPERFAMILY NAC domain 453 535 IPR036093 GO:0003677|GO:0006355
Sto7g2432 714 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 190 IPR006501 GO:0004857
Sto7g2432 714 Gene3D - 180 439 IPR012334 -
Sto7g2432 714 ProSiteProfiles NAC domain profile. 404 551 IPR003441 GO:0003677|GO:0006355
Sto7g2432 714 Gene3D NAC domain 440 545 IPR036093 GO:0003677|GO:0006355
Sto7g2432 714 SUPERFAMILY Pectin lyase-like 218 447 IPR011050 -
Sto7g2432 714 MobiDBLite consensus disorder prediction 199 218 - -
Sto7g2432 714 SMART PMEI_2 30 191 IPR006501 GO:0004857
Sto7g2432 714 MobiDBLite consensus disorder prediction 685 714 - -
Sto7g2432 714 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED 20 191 - -
Sto7g2432 714 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 59-RELATED 223 448 - -
Sto7g2432 714 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 190 IPR035513 -
Sto7g2432 714 Pfam Pectinesterase 225 439 IPR000070 GO:0030599|GO:0042545
Sto7g2432 714 Pfam Plant invertase/pectin methylesterase inhibitor 34 190 IPR006501 GO:0004857
Sto7g2432 714 PANTHER PECTINESTERASE 20 191 - -
Sto7g2432 714 PANTHER PECTINESTERASE 223 448 - -
Sto7g2432 714 Pfam No apical meristem (NAM) protein 453 528 IPR003441 GO:0003677|GO:0006355
Sto7g2432 714 CDD PMEI-like_3 38 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2432 Sto-Chr7 29807132 29827277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2432 224 448 Carbohydrate Esterase AT5G51490 67.257 5.54e-109 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto7g2432 Pectinesterase 9.2e-100 CL0268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2432 K01051 - gmx:100806133 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2432 7 29807132 29827277 Sto7g2432 7 29807132 29827277 ECH