Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2428 ATGGACCTGAAGTCAAACCATACTCCTCTTCTTACTGATGCTGCACCCATAACAAAATCAAGGCTGGGTGTGCATTCGAGTCTGTTGCCTTATTCTCCCACAGGGGCAGCTTTTTCACCTGGTCTGCTTCTGACAATTCCAAGGAAGAAGACAGGAATTCTTGAAGATGTTCGTTCTAGTGGTTGGCTGGATGCCATGAAATCATCATCTCCTACGGCCAAGAAGATAACAAAGGATATTAATCATGGGTTTGCATCATCTGATGCTGATAGTGCTTACTGTACCTGGCTGCAAAAGTATCCTTCAGCACTAGCATCTTTTGAGAAAATTGCGAACTATGCAAAAGGCAAGAGAATAGCATTGTTTCTGGATTATGATGGAACACTTTCACCGATAGTGGATAATCCTGACTGTGCTTTCATGTCTGAAAGTATGCGTTCTGCTGTTAAAAAGGTTGCAGAGCTTTTTCCAACAGCAATAATTAGTGGAAGAAGTCGTGACAAGGTATATGAATTTGTTGGACTAACAGAACTCTACTATGCTGGTAGTCATGGGATGGACATCATTGGTCCTGTCAGACAATCTATATCTGATAACAACCCTAATTGCATCAGGTCTACTAACAATAAGTGCAAGGAAGTTAATTTATTCCAACCTGCTGCCGAATTCCTGCCAATGATTGATGAGGTGTTTAGGTCCCTTGTTGAATGTACGAACGACATTAAAGGAGCGAGTGTTGAGAACAATAAATTTTGTGTTTCTGTACACTACCGCAATGTAGACGATAAGTATTGGGATATAGTGGGGCAACGAGTCGTTGATATTCTGAAGGACTATCCACGTTTGCGATTAACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTCATCAATTGGGATAAGGGGAAAGCTGTAACATTTTTACTTGAATCACTTGgACTTAGCAACTGTGATGATGTGCTTCCTATATATGTTGGAGATGATCGGACCGATGAAGATGCATTTAAGGTTTTGAGAGAGGGAAATAGAGGTTATGGCATCTTAGTTGCTTCTGCACCCAAAGAAAGCAATGCAGTTTACTCTCTTCGCGATCCATTAGAGGTCATGGAATTTCTCAAGTCACTTGCGGCTTGGAAGTCAAGCCTCCTTAAAAGTCTCATATAG 1164 0.4175 MDLKSNHTPLLTDAAPITKSRLGVHSSLLPYSPTGAAFSPGLLLTIPRKKTGILEDVRSSGWLDAMKSSSPTAKKITKDINHGFASSDADSAYCTWLQKYPSALASFEKIANYAKGKRIALFLDYDGTLSPIVDNPDCAFMSESMRSAVKKVAELFPTAIISGRSRDKVYEFVGLTELYYAGSHGMDIIGPVRQSISDNNPNCIRSTNNKCKEVNLFQPAAEFLPMIDEVFRSLVECTNDIKGASVENNKFCVSVHYRNVDDKYWDIVGQRVVDILKDYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNRGYGILVASAPKESNAVYSLRDPLEVMEFLKSLAAWKSSLLKSLI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2428 387 Gene3D - 224 384 IPR023214 -
Sto7g2428 387 Gene3D - 119 207 IPR023214 -
Sto7g2428 387 Pfam Trehalose-phosphatase 122 365 IPR003337 GO:0003824|GO:0005992
Sto7g2428 387 TIGRFAM T6PP: trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Sto7g2428 387 SUPERFAMILY HAD-like 120 378 IPR036412 -
Sto7g2428 387 CDD HAD_TPP 120 370 - -
Sto7g2428 387 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 121 339 IPR006379 -
Sto7g2428 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 382 - -
Sto7g2428 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 382 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2428 Sto-Chr7 29762108 29764627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2428 113 376 Trehalose Biosynthesis Gene Families AT1G70290 27.113 1.81e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2428 K01087 - gmx:100819495 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2428 7 29762108 29764627 Sto7g2428 7 29762108 29764627 ECH