Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2407 ATGATGATGGATAGAATCTGGAGTAAAGGAGATAAATTGATCAAGTCTCAATCTCAGCATTCATCATCTTCAGTTGTTGCTGTAGCTATTAAGGGTAACAAGAAAAGCAAACACGTATTACGATGGGCATTGGATAAGTTTGTGCCTGAGGGAAGGATTATGTTCAAGCTCATACATGTCCATGCTGGTATAAATGTGGTTCCAACACCAATGGGAAATGCCATCCCTACGTCACAAGCGTGTACTGACGAAGCAGCTTCTTTCAAGAAGGAAGTGAAGTGCCAGACAAGTCAAATGCTTCTACCTTATGTGAAAATGTGTGATCAAAGAAAGGTTCTTGTAGATGTTACCGTGATTGAATCCGATGATGTGGCATCTGCAATAGCAGAGGAAGTTGCCAAGTGTGCTATAACCAAACTAGTTATAGGTGCTTCATCTCATGTCATATTTACAAGTAAACTTAAGGGTGTATCTGCAAAAATATCAGTATGTACTCCAAGATTTTGCACAGTGTATGCTGTTTCCAAAGGGAAATTGTCTTCTTTACGGTCATCAGACATAGAGATCAATGGAAGCTTGACGGAGGACAACAGCGAAACCAGCGGTTCCACCAACAGCTCTTCAAACTACACTTCCACCTCTCAGACAGACTCTGGCTCAGTTGCATCACATGCTCCTCTACATTCCTCTTCCCTAGCAGCACAGAGATATCAAGCTCTTTCCTCCATTAATCAGACCCTTCAAAGCACAAAATCTGGTTTAGCTGAAACTAATCACTCAAGACGCCATTCTCTAGATCTCGGTATAGAGAAAACCGCTACATGTTCTTCTGCCAGAAATTCAGATATTGACTACACTCTGAGCCGGGCCTCTAGTTGGAAAAGCAATCTCTCAGATACTGAATTTTGGAATTACTATCAAAGTTCCACTGTGGATGTGCCACCAGCAACCGAACTTCCTTCACCTGATAAGCAGGAAAATTTTAACTTTGAGCTGGAAAAGCTAAAGATTGAATTAAGACATGCCCAAGAAATGCATGCCATAGCTCAAACTCAGAAAGTTAATGCAAGGCAAaagCTGACTGATCTAAGTAAGAGGCGATATGAGGAGTCCCTAAAGTTGAAGGATATTATTGCTAAGGAGGAGATGGCCAAAAAAATAgcaataagagagagagagaaatgtgaAGCTGCACAAAGAGAAGCTTCTTATTTGAAAGAATGTGCAAAAGAAGAAGCCATTGAAAGAAGGGAAGCAGAGATGAGAGCTGTTCGTTCTGCCATAAAGAATGAAAAGCTAGAAAATGCTCTTAGTGGTTCGACGCTTCAATACAAGAATATTACCTGGGATGAAATTGTGTCTGCCACTTTGTCTTTCTCTGAAGAGCTTAGAATTGGAATGGGAGCATGTGGAGCGGTGTACAAGTGCAGTTTGTATCATACAACTGTGGCAGTAAAAGTTCTCCACTCTAAAGAGAGCCGTAGTATCAAGCAACTCCAGCAGGAGCTAGAAATCTTGAGCAGAATTCGCCATCCAAATTTACTTCTCCTTATTGGGGCATGTCCTGATCATGGATGCATTGTGTACGAATACATGGAGAACGGTAGCTTGGAGGACAGGTTACTAAAAAAGAACAGTACTGCCCCAATCCCATGGTTCAAGAGGTACCAAATTGCATGGGAAGTAGCCTCAGCTCTTGCCTTTCTTCACAGCTCAAAGCCGAAACCTATTATCCATCGTGATTTGAAACCGGCAAACATCTTGCTTGATGGTAACCTTGTGAGCAAGATTGGCGACATTGGCCTTTCTACAATACTCAATTCAGATACTTCTTCTACCATGTACCAAGACACAGAGCTTGCTGGGACACTATCCTACATTGATCCTGAGTATCAAAGGACAGGGCTAATATCTCCAAAATCTGATGTCTATGCTTTTGGAATGGTTATCCTACAGTTATTGACTGCAAAACCAGCAAGAGCACTAACTCATGTGGTAGAAACAGCCATTGATGATGGCAATTTAGCCGATATTTTGGATCCTGAGGCGGGGAATTGGCCATTTCAGGAGACGCTGGACTTGGCGCGATTAGGGCTAAGCTGTGCAGAACTTCGACGTAGAGACCGGCCCGATTTGAAATATCATGTGCTTCCCACACTAATGAGACTGAAAGAAGTTTCTGATAGGGCCCAACCTTCTGCTTCAGCAATTAGTGTTAATTATAGACCTCCTAATCACTTGATATGTCCAATACTTCAgGATGTGATGGATGATCCTTGTGTTGCTGCAGACGGATACACATATGATCGCAAAGCAATCGTGAGATGGTTGCAAAAGAATGACAAGTCACCAATGACGAATATGGAATTACCTCATAAGAATCTGATTCCGAATTACACACTTCTATCAGCAATTATGCAGTGGAAATCTGGGGGAAAATGA 2442 0.4156 MMMDRIWSKGDKLIKSQSQHSSSSVVAVAIKGNKKSKHVLRWALDKFVPEGRIMFKLIHVHAGINVVPTPMGNAIPTSQACTDEAASFKKEVKCQTSQMLLPYVKMCDQRKVLVDVTVIESDDVASAIAEEVAKCAITKLVIGASSHVIFTSKLKGVSAKISVCTPRFCTVYAVSKGKLSSLRSSDIEINGSLTEDNSETSGSTNSSSNYTSTSQTDSGSVASHAPLHSSSLAAQRYQALSSINQTLQSTKSGLAETNHSRRHSLDLGIEKTATCSSARNSDIDYTLSRASSWKSNLSDTEFWNYYQSSTVDVPPATELPSPDKQENFNFELEKLKIELRHAQEMHAIAQTQKVNARQKLTDLSKRRYEESLKLKDIIAKEEMAKKIAIREREKCEAAQREASYLKECAKEEAIERREAEMRAVRSAIKNEKLENALSGSTLQYKNITWDEIVSATLSFSEELRIGMGACGAVYKCSLYHTTVAVKVLHSKESRSIKQLQQELEILSRIRHPNLLLLIGACPDHGCIVYEYMENGSLEDRLLKKNSTAPIPWFKRYQIAWEVASALAFLHSSKPKPIIHRDLKPANILLDGNLVSKIGDIGLSTILNSDTSSTMYQDTELAGTLSYIDPEYQRTGLISPKSDVYAFGMVILQLLTAKPARALTHVVETAIDDGNLADILDPEAGNWPFQETLDLARLGLSCAELRRRDRPDLKYHVLPTLMRLKEVSDRAQPSASAISVNYRPPNHLICPILQDVMDDPCVAADGYTYDRKAIVRWLQKNDKSPMTNMELPHKNLIPNYTLLSAIMQWKSGGK 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2407 813 Coils Coil 489 509 - -
Sto7g2407 813 SMART serkin_6 459 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2407 813 Gene3D Transferase(Phosphotransferase) domain 1 532 739 - -
Sto7g2407 813 SUPERFAMILY RING/U-box 741 809 - -
Sto7g2407 813 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 742 812 IPR013083 -
Sto7g2407 813 CDD STK_N 30 177 - -
Sto7g2407 813 SMART Ubox_2 746 808 IPR003613 GO:0004842|GO:0016567
Sto7g2407 813 CDD RING-Ubox_WDSUB1_like 747 787 - -
Sto7g2407 813 MobiDBLite consensus disorder prediction 191 224 - -
Sto7g2407 813 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35 21 809 - -
Sto7g2407 813 Pfam Protein kinase domain 461 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2407 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Sto7g2407 813 PANTHER OS02G0152300 PROTEIN 21 809 - -
Sto7g2407 813 Gene3D HUPs 16 160 IPR014729 -
Sto7g2407 813 SUPERFAMILY Protein kinase-like (PK-like) 441 712 IPR011009 -
Sto7g2407 813 Gene3D Phosphorylase Kinase; domain 1 438 531 - -
Sto7g2407 813 Pfam U-box domain 744 809 IPR003613 GO:0004842|GO:0016567
Sto7g2407 813 Coils Coil 325 352 - -
Sto7g2407 813 Coils Coil 414 434 - -
Sto7g2407 813 ProSiteProfiles U-box domain profile. 742 813 IPR003613 GO:0004842|GO:0016567
Sto7g2407 813 ProSiteProfiles Protein kinase domain profile. 459 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2407 Sto-Chr7 29577882 29583503 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2407 23 810 U-box Gene Family AT4G25160 49.821 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Sto7g2407 Pkinase 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2407 - - gsj:114409387 1083.94