Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2388 ATGGctccctcctctctctcttctcgctTCCATGACTCCCTCACTCGACAAGCCTTTCGCTCCTATCTCGCTGAGTTCATCTCCACTTTCTTCTATGTCTTCCTCGTCATTGGCTCTTCCATGTCTTCCCGGAAGTTGATGGCTGATGGTAGATTATTGGAGCCTTCAAGTCTGGTTGTGGGAGCCATAGCAAATGCGTTTGCATTGTCTTCTGTAGTGTTTTTGGCGTGGGACATCTCTGGAGGGCATGTCAACCCTGCAGTGACCTTCGGAAGGGTAGTTGGAGGGCACATTAGTGTATCCACTGCCCTCTTTTACTGGCTTGCTCAGATTATTGCCTCTGTCATCGCTTGCCTCTTTCTCAAGATCCTAGTTGTTGGAGTgCATGTCCCAACATACACAATAGCAGTAGAAATGACTGGTTTTGGGGCATCCATGTTAGAGGGTGTCCTAACATTTGGTCTGGTGTACACTGTGTATGCTGCTAAGGACCCTAAGCGTGGGCCATTGGGGTGGATGGGTGCCCTAGCCATAGGGTCCATAGCAGGAGCCAGTGTGCTAGCCGCTGGTCCATTCTCTGGAGGGTCAATGAACCCTGCTTGTGCCTTTGGGTCAGCCTCTATTGCAGGAAGTTTCAAGAACCAAGCAGTGTATTGGGTGGGACCCTTGATTGGTGCTGCCATTGCTGGTCTTCTCTATGATAGGGTAGGCTACCCTTCTCAGACTGCAGATTCTATCAGTGGGATTGCAGAAGGAGATAGGGTGTGA 768 0.4857 MAPSSLSSRFHDSLTRQAFRSYLAEFISTFFYVFLVIGSSMSSRKLMADGRLLEPSSLVVGAIANAFALSSVVFLAWDISGGHVNPAVTFGRVVGGHISVSTALFYWLAQIIASVIACLFLKILVVGVHVPTYTIAVEMTGFGASMLEGVLTFGLVYTVYAAKDPKRGPLGWMGALAIGSIAGASVLAAGPFSGGSMNPACAFGSASIAGSFKNQAVYWVGPLIGAAIAGLLYDRVGYPSQTADSISGIAEGDRV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2388 255 PANTHER AQUAPORIN TIP5-1-RELATED 5 251 - -
Sto7g2388 255 Gene3D Glycerol uptake facilitator protein. 5 247 IPR023271 -
Sto7g2388 255 Pfam Major intrinsic protein 17 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 SUPERFAMILY Aquaporin-like 13 239 IPR023271 -
Sto7g2388 255 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Sto7g2388 255 PRINTS Major intrinsic protein family signature 20 39 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto7g2388 255 PANTHER AQUAPORIN-8 5 251 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2388 Sto-Chr7 29438004 29439584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2388 1 246 Major Intrinsic Protein MIP AT3G47440 62.451 1.50e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2388 K09873 - gmx:100801448 372.859