Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2387 ATGTACATCAAGGAGGTTTGCTTGGAAGGTTTCAAATCGTATGCTACCAGAACTGTTGTTCCGGGCTTCGATCCCTACTTCAATGCCATTACCGGTTTGAACGGTTCCGGCAAGTCGAACATTCTTGATTCGATTTGCTTTGTACTTGGTATCACCAATTTGCAGCAAGTTCGGGCTTCGACCCTCCAGGAGCTCGTGTACAAGCAAGGGCAGGCTGGGATTACGAAAGCTACAGTGTCGATTGTGTTTGATAATAAGGATAGGAGTCGGAGTCCTCTTGGATATGAAGACCATCCAGAGATTACAGTGACAAGAcagATTGTTGTTGGAGGGAGGAACAAATATTTGATCAATGGGAAACTTGCCCAGCCTAGTCAAGTTCAAAACCTTTTCCATTCGGTTCAGCTAAACGTTAATAACCCGCATTTTCTCATAATGCAAGGGCGTATCACCAAGGTTTTAAATATGAAACCACCAGAGATATTGTCAATGCTTGAGGAAGCTGCAGGGACAAGAATGTATGAGACGAAGAAGGAGGCTGCTCTGAAAACACTTGAGAAGAAGCAGAGCAAGGTTGATGAGATTAATAAGCTTCTTGATCAGGAGATACTACCTGCTCTGGAGAAGTTAAGGAAAGAAAGGACACAGTACATGCAATGGGCTAATGGCAATGCTGAATTAGATAAGCTGAGAAGATTTTGTATAGCTTATGAGTATGTTCAAGCAGAGAGGATTAGAGACAATGCAGTGTCTGAGGTGGAACAAGTAAAGGCCAAGATAGCTGAGGTTGATGACAGCACTAAGTCAACGCAAATGGAAATACAGGAAATGGAGACCAAAATAGCAAAGTTGACTGcagaaaaggaagaaaacatGGGTGGAGAAGTGAAATCTTTGTCAGAGAAGGTAGATGCACTTTCACAAGATCTTGTGAGGGAAACATCTGTACTAAATAATAAGGAGGACACTCTAAAAAGTGAAAAGGCCaatgaaaaaaatATTGTTAATAATGTTGAAGAATTAAAGCAATCTGTTGAAGAGAAGACCTTAGCTGTAAAAAGGGCCGAAGAGGGTGCTGCTGATCTGAAAAAGAGAGTTGATGAGCTTTCTAAGAGTCTGGAGGAGCATGAAAAAGAATACCAGGGTGTCTTAGCTGGGAAGAGCAGTGGAGATGAGGAGAAATGCTTAGAGGATCAGCTAGCTGATGCAAAAATAGCAGTTGGGAGTGCTGAAACAGAATTGAAGCAGCTGAAAACCAAAATCAGCCATTCTGAAAAGGAACTGAAAGAGAAAGCACATCAATTAAAGTCAAAACAGGAAGAAGCTACTTCTGTAGAAAATGAGCTAAATGCTAGAAGGAAAGATGTGGAGAATGTTAAGACAGAATTGGAGTCTCTTCCTTATAAAGATGGTGAGATGGAATCTTTGCAAAAGGAGCGTGCATCTGAGATGGAGTGGGTGCAAAAGTTGAAGGATGAAACACGCAATCTTTCAGCACAATTATCAAATGTTGAATTTACATACCGTGACCCAGTCAAGAATTTTGATAGGTCAAAAGTGAAAGGTGTGGTTGCAAGACTCATCAAAGTCAAGGACGGTGCAACAATGACTGCCCTAGAGGTTACTGCTGGTGGAAAGTTGTTCAATGTTGTTGTTGACACAGAAAATACTGGAAAGCAATTACTACAAAATGGTGATTTAAGAAGAAGAGTGACAATTATACCTCTAAACAAAATACAACCTCATACTGTTCCCTCTAGAATTCAACAAGCTGCTGTTAGATTGGTTGGTAAAGAAAATGCTGAATTGGCACTTTCTTTGGTTGGTTATGAAGAAGAATTGAAGAGTGCTATGGAATACGTATTTGGTTCCACCTTTGTTTGCAAAAACACTGATGCTGCTAAGGAGgTGGCATTTAGTAAGGAGATTCGCACCCCGAGTGTCACTCTTGAAGGAGATATATTTCAGCCAAGTGGTCTTCTGACTGGAGGAAGCCGGAAGGGTGGTGGCCAACTTTTAAGGCTACTTCATGATTTAGCAGAGGCTGAGTCAAAACTTTCAATACATCAAAGAAGGTTGTCTGAGGTTGAGGCAAAGATTACGAAGCTCCTTCCTCTTCAGAAAAAGTGGCAGGACCTCAAAGCACAGTTAGAACTGAAGTCATATGATCTTTCATTGTTTCAAAGTAGAGCTGAGCAAAATGAGCATCACAAGCTTGGGGAACTAGTGAAGAAGATTGAACAAGAGCTCACTGAAGCAAAATCTGCAATCAATGAAAAGCAGCTTCTTTATGAAAACTGTGTCAAgactgtttcattgcttgagaAATCAATTAAAGAACACGATAATAATCGTGAGAGTAGACTAAAAAACTTGGAGAAGAAGATAAAGTCAAACAAATCCCAAATGCAGTCATCTTTAAAAGATCTCAAGGTATTTTGTAGTTTCGAaggtttatga 2460 0.3963 MYIKEVCLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRASTLQELVYKQGQAGITKATVSIVFDNKDRSRSPLGYEDHPEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGNAELDKLRRFCIAYEYVQAERIRDNAVSEVEQVKAKIAEVDDSTKSTQMEIQEMETKIAKLTAEKEENMGGEVKSLSEKVDALSQDLVRETSVLNNKEDTLKSEKANEKNIVNNVEELKQSVEEKTLAVKRAEEGAADLKKRVDELSKSLEEHEKEYQGVLAGKSSGDEEKCLEDQLADAKIAVGSAETELKQLKTKISHSEKELKEKAHQLKSKQEEATSVENELNARRKDVENVKTELESLPYKDGEMESLQKERASEMEWVQKLKDETRNLSAQLSNVEFTYRDPVKNFDRSKVKGVVARLIKVKDGATMTALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPLNKIQPHTVPSRIQQAAVRLVGKENAELALSLVGYEEELKSAMEYVFGSTFVCKNTDAAKEVAFSKEIRTPSVTLEGDIFQPSGLLTGGSRKGGGQLLRLLHDLAEAESKLSIHQRRLSEVEAKITKLLPLQKKWQDLKAQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELTEAKSAINEKQLLYENCVKTVSLLEKSIKEHDNNRESRLKNLEKKIKSNKSQMQSSLKDLKVFCSFEGL 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2387 819 Coils Coil 789 809 - -
Sto7g2387 819 Coils Coil 739 763 - -
Sto7g2387 819 Coils Coil 672 699 - -
Sto7g2387 819 MobiDBLite consensus disorder prediction 422 453 - -
Sto7g2387 819 Coils Coil 178 198 - -
Sto7g2387 819 Coils Coil 324 379 - -
Sto7g2387 819 Gene3D - 591 666 - -
Sto7g2387 819 SUPERFAMILY Smc hinge domain 478 686 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Sto7g2387 819 Coils Coil 239 259 - -
Sto7g2387 819 Coils Coil 267 287 - -
Sto7g2387 819 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2 1 812 - -
Sto7g2387 819 Coils Coil 400 466 - -
Sto7g2387 819 Pfam SMC proteins Flexible Hinge Domain 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Sto7g2387 819 Coils Coil 473 493 - -
Sto7g2387 819 Gene3D - 1 202 IPR027417 -
Sto7g2387 819 CDD ABC_SMC2_euk 1 156 IPR027120 GO:0005524|GO:0016887
Sto7g2387 819 Gene3D - 422 590 - -
Sto7g2387 819 SMART SMC_hinge_2 518 638 IPR010935 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Sto7g2387 819 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2 1 812 - -
Sto7g2387 819 Pfam RecF/RecN/SMC N terminal domain 2 440 IPR003395 -
Sto7g2387 819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 325 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2387 3 170 Structural Maintenance of Chromosomes family AT5G15920 22.619 2.13e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2387 K06674 - gmx:100788674 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2387 7 29431789 29436451 Sto7g2387 7 29431789 29436451 ECH