Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2369 ATGAGGGAAATCAAGGTCCAGAAGCTTGTCCTCAACATCTCAGTGGGTGAGAGTGGAGATCGTCTCACCAGAGCTGCTAAGGTGTTGGAGCAGCTTAGTGGCCAAACCCCAGTTTTCTCCAAAGCAAGGTATACTGTCCGTTCCTTTGGTATTAGAAGAAATGAAAAGATTGCATGCTATGTCACTGTTAGAGGTGACAAGGCAATGCAGCTTTTGGAGAGTGGTCTGAAGGTGAAGGAATATGAACTTCTGAGAAGGAACTTCAGTGATACCGGGTGTTTTGGCTTCGGtattcaggagcatattgattTGGGAATCAAGTATGATCCATCTACTGGTATTTATGGAATGGACTTCTTTGTTGTTTTGGAGCGCCCCGGTTACCGTGTGGGACGTCGCCGAAGGTGCAAGTCACGTGTTGGGATCCAGCACCGTGTCACCAAGGAGGATGCTATGAAGTGGTTCCAGGTGAAATACGAAGGAGTGATCCTTAACAAGTCCCAGGCTATCGTTGGTTAG 519 0.4605 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKSQAIVG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2369 172 PIRSF RPL5p_RPL5a_RPL11e_RPL5o 1 162 IPR002132 GO:0003735|GO:0005840|GO:0006412
Sto7g2369 172 SUPERFAMILY RL5-like 1 163 IPR022803 -
Sto7g2369 172 Pfam Ribosomal protein L5 1 52 IPR031310 -
Sto7g2369 172 Pfam ribosomal L5P family C-terminus 56 154 IPR031309 -
Sto7g2369 172 PANTHER 60S RIBOSOMAL PROTEIN L11-1 1 170 - -
Sto7g2369 172 ProSitePatterns Ribosomal protein L5 signature. 29 45 IPR020929 GO:0003735|GO:0005840|GO:0006412
Sto7g2369 172 Gene3D - 1 167 IPR022803 -
Sto7g2369 172 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 1 170 IPR002132 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2369 Sto-Chr7 29269582 29271336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2369 1 172 Cytoplasmic Ribosomal Protein Gene Family AT2G42740 94.767 9.43e-122 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2369 K02868 - gmx:100499863 323.553