Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2352 ATGGGGTCTCAAGGCGGTGGTGACACTAATGGAAAACAGTCACAATTCCAGCCTTTGGTGCGTCAAAACTCAATGTACAGTCTCACACTCgatgaggttcagaatcaattAGGTGACTTAGGAAAGCCGCTAAGTAGTATGAACCTTGATGAGCTTCTAAAAAATGTATGGACTGCTGAGGCAAACCAGTCCATGGGTATGGACATTCAAGGCACGGCACAAGCTAGTCAAACCGCTCTTCAGCGTCAAGCTAGTCTGTCTTTAACCAGTGCACTAAGCAAGAAGACAGTTGATGAGGTTTGGCGAGACATCCAACAAAGCAAAAATAACGAGGAGAAGAAGTCTCAGGAGAGGCAGCCAACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGAGTTGTCGCGGAAGCGTCTTCTGATAGAAAGAATATGGGTCCTATAGTTGGGGTTGATTCAAATGTAGCTGCATCACAGTTTCCTCAGCAAGGCCCGTGGATCCAGTATCCGCAACTGCAATATCAGCATCCCCAACAAAGTTTAATGGGAATTTATATGCCTGGTCATACTATAGCACAGCCAATGCATATAGGAGCTGGTTCTGCATTGGATGTTCCTTTCGCAGATATGCCCATGGCACTGCCTTCACCTGTGATGGGAACATTGTCAGATACGCAGACATCTGGCAGAAAAAGAGGCACACCAGAGGACATGATCGAGAAGACTGTTGAAAGGAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTACACACATGAATTGGAGAACAAAGTCTCACGATTGGAAGAGGAAAATGAATTGCTGAGGAAACGGAAGGAGCTGGAGAACATGTTGCCGTGTGCACCGCCTCTCGAGCCTAAATATCAGCTTCGGCGAACATCGATCAGGATAGCTATACAATGCCTTGCTTTTTTCTTGCTATTAGGCTCTTTCAAACTCTATCATGAGATCCTTGAGTTCCTGCACAATAACAAACAGCAAATTGCATTAATAGAACAACATCCAACAGGCTTTCTTGATCCTGAAGTTGCAGTGAAGTCTACCAGTAGCTCTCTGCAAAGTTACAAACAAACACACAATATAGTAAAACTCTCAAATGATGGGACTTGGTGGAAGCAAAAAATCAATACAGATTCTTTTTCTTTGAACCGCATGAATGAAGGCAACTAG 1227 0.4393 MGSQGGGDTNGKQSQFQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEANQSMGMDIQGTAQASQTALQRQASLSLTSALSKKTVDEVWRDIQQSKNNEEKKSQERQPTLGEMTLEDFLVKAGVVAEASSDRKNMGPIVGVDSNVAASQFPQQGPWIQYPQLQYQHPQQSLMGIYMPGHTIAQPMHIGAGSALDVPFADMPMALPSPVMGTLSDTQTSGRKRGTPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTHELENKVSRLEEENELLRKRKELENMLPCAPPLEPKYQLRRTSIRIAIQCLAFFLLLGSFKLYHEILEFLHNNKQQIALIEQHPTGFLDPEVAVKSTSSSLQSYKQTHNIVKLSNDGTWWKQKINTDSFSLNRMNEGN 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2352 408 Pfam bZIP transcription factor 247 292 IPR004827 GO:0003700|GO:0006355
Sto7g2352 408 SUPERFAMILY Leucine zipper domain 247 292 IPR046347 GO:0003700|GO:0006355
Sto7g2352 408 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Sto7g2352 408 MobiDBLite consensus disorder prediction 222 241 - -
Sto7g2352 408 SMART brlzneu 243 322 IPR004827 GO:0003700|GO:0006355
Sto7g2352 408 CDD bZIP_plant_BZIP46 247 301 - -
Sto7g2352 408 Gene3D - 245 298 - -
Sto7g2352 408 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
Sto7g2352 408 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 2 3 314 - -
Sto7g2352 408 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 3 314 IPR043452 GO:0003700|GO:0045893
Sto7g2352 408 Coils Coil 263 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2352 Sto-Chr7 29108163 29116167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2352 12 313 bZIP Transcription Factor Family AT3G56850 56.678 3.89e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto7g2352 bZIP_1 9.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2352 K14432 - jre:109012797 477.633