Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2351 ATGCTTGTCGCATTCTTGCCGGTGGAAACCACCGGTCTCCGCCGTGCCGCCGGGTTTGCCGCCGTAATCGACGCGGTCGTAGCCGACATCGAAATCACTGATCTACGGTTCAGGAATCAATTGGGGAAGTTGAATAAGAATCTGGAGTTGTCGTACTGTAGGAGTTTTTCTGTTGGAGCGAGCGAGCGAGATTGCAGATTGAAATTGGCGGAGCGGGAAACCACAGGAGGCACGAATCCGAATTCTCTGGATAACCCGAGAGTAGACTACACGCGCCTCACGCGTGACGTACCATTGAAAATCAGCAGGCTGAAAACGGTTGTTCTCATCATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAACCAAATACAATTAATAACCTATTAGATGGTGAAGAAAAGTTGCATAATGGAGATTTAGAAGGCAGAAATATGGTTGGTGCTAGTGTTGAGGTACATGCTCTCGATGGTGGAGATTTGAATTCATCCACAGTGGATATGGTAATCTTTAAAGAAGATTCTAATCTTGAGCCTCTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCGCGGTCCATGGGATTTAACACTGCAATACAAAATAGTCGCCGTTCAAAAACAACAAGAGAATTTATAGATGCTAAGTTTGCTTGTTCCAAATATGGAACAAAACGAGAGTATGACAAATCATTCAATAATCGACCACGTTCCAGACAGAACAATCAAGATGCTGAAAATTCAACTAGTCGAAGATCTTGTTCAAAGACTGACTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCCGATGGAAAATGGGTAATACATAGTTTTGTGAAGGAACATAATCATGAGCTTTTACCAGCCCAAGCTGTCAGTGAGCAAACAAGAAAAATGTATGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAATCCATTTGATAAAGGTCGGAATTTGGGCCTGGAGTCAGGGGATGCCAAAGTTctgcttgattttcttgtacatATGCAAAGCATGAATTCAAACTTCTTTTATGCAGTAGATATTAGCGATGATCAACgtttaaaaaatcttttatgGATTGATGCTAAAAGTAGGCATGACTATATAAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCACTTTTTGTTGGAGTGAATCAGCATTATCAATTTATATTGCTTGGGTGTGCATTGATATCAGATGAAAGTGCTGGTACTTATTGTTGGCTAATGAGGACGTGGCTCAAAGCAGTTGGTGGTCAAGTTCCAAAAGTGATAGTTACTGACCATGACAAGACATTGAAGTCAGTTATTCTAGATGTCTTTCCTAATGCTCATCATGGTGTATGCTTATGGCATATATTGGGGAAGGTATCTGAAAATTTGGCTCATGTAACTAAGCGATATGAGAATTTTATggcaaaatttgaaaaatgcaTCTATAGGTCATGGACAAGTGATGAGTTTGAGAAGAGGTGgtggaaaattgttgataagtTTGAACTCAGAGAAGATGAATGCATGCAGTCATTGTATGAAGATCGGAAATTATGGGTGCCAACATTCATGAGGGATGTTTTCGTAGGCGGTATGTCTACCATCCAACGATCTGAAAGTGTGAATTCCTTTTTTGATAAATATGTTCATAAGAAGACCTCTGTGCAAGATTTTGTCAGACAGTATGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCCGATACTTGGAATAGAGTGGCAACGTTAAAAACTCCTTCACCACTGGAGAAAAGTGTTGCAGGGAGTTACACACTTGCAGTGTTCAAGAAGATTCAAGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAAGCTGAAAGACAGGATGATACAGGGATTACTTACAAGGTTCATGATATGGAAAAGAATCAAGACTTCTTCGTTGtttataatcaaattaaatcagAGGTGTCTTGCATATGTCGGTTATTTGAATATAGAGGTTTTCTTTGTCGACATGCATTGATTGTTCTTCAATATTCTGGCCTTTCAGTTATCCCATcccaatatattttaaaacGGTGGACTAGAGATGCAAAGGCAAGTCATATAATTGGAGAAGAATCTGAACATATGCTGGCTAGGGTGCAACGATACAATGATTTATGTCAGCAAGCATTAAAGTTAAGTGAAGAGGGATCTCTGTCTCAAGACAGTTACAGTATTGCATTCCATGCACTACGCGAAGCGTACAAAAGTTGTGTGGGTATTAACAATTCTAGTAAGAGCCCTATGGAAGTTGGCACATCGGCCGGTCAAGGTCAGCTGTCCACCGAAGAAGATACCCAAAGTAGAAGTATGGGCAAgacaaacaaaaagaagaatccaactaaaaagaaaaagGACAAATTCAACACAAGAACAGTAACCCTTGACGGTTATTATGGCGCTCAGCAGAGTGTACAGGGAATGTTGAACTTGATGGGACCAACACGTGATAATTACTATGGGAATCAACAGACTATTCAGAGCCTGGGACAATTAAATTCAATTCCACCTAGCCACGATGGTTATTATAGTGCTCATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTCCGGGCATCAACCGGTTTCACTTACGGCATTCGGGATGATCCTAATGTAAGACCCACACAGTTGCATGAGGATCCATCAAGGCACGCATGA 2811 0.3913 MLVAFLPVETTGLRRAAGFAAVIDAVVADIEITDLRFRNQLGKLNKNLELSYCRSFSVGASERDCRLKLAERETTGGTNPNSLDNPRVDYTRLTRDVPLKISRLKTVVLIMDIDLRLPSGEHDKEDEEPNTINNLLDGEEKLHNGDLEGRNMVGASVEVHALDGGDLNSSTVDMVIFKEDSNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTTREFIDAKFACSKYGTKREYDKSFNNRPRSRQNNQDAENSTSRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKNEKNPFDKGRNLGLESGDAKVLLDFLVHMQSMNSNFFYAVDISDDQRLKNLLWIDAKSRHDYINFCDVVSFDTTYVRNKYKMPLALFVGVNQHYQFILLGCALISDESAGTYCWLMRTWLKAVGGQVPKVIVTDHDKTLKSVILDVFPNAHHGVCLWHILGKVSENLAHVTKRYENFMAKFEKCIYRSWTSDEFEKRWWKIVDKFELREDECMQSLYEDRKLWVPTFMRDVFVGGMSTIQRSESVNSFFDKYVHKKTSVQDFVRQYEAILQDRYEEEAKADSDTWNRVATLKTPSPLEKSVAGSYTLAVFKKIQVEVIGAVACHPKAERQDDTGITYKVHDMEKNQDFFVVYNQIKSEVSCICRLFEYRGFLCRHALIVLQYSGLSVIPSQYILKRWTRDAKASHIIGEESEHMLARVQRYNDLCQQALKLSEEGSLSQDSYSIAFHALREAYKSCVGINNSSKSPMEVGTSAGQGQLSTEEDTQSRSMGKTNKKKNPTKKKKDKFNTRTVTLDGYYGAQQSVQGMLNLMGPTRDNYYGNQQTIQSLGQLNSIPPSHDGYYSAHQSMPGLAQLDFFRASTGFTYGIRDDPNVRPTQLHEDPSRHA 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2351 936 MobiDBLite consensus disorder prediction 249 264 - -
Sto7g2351 936 Pfam MULE transposase domain 399 491 IPR018289 -
Sto7g2351 936 SMART 26again6 690 717 IPR006564 GO:0008270
Sto7g2351 936 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 157 873 IPR031052 GO:0006355
Sto7g2351 936 ProSiteProfiles Zinc finger SWIM-type profile. 680 715 IPR007527 GO:0008270
Sto7g2351 936 MobiDBLite consensus disorder prediction 798 838 - -
Sto7g2351 936 MobiDBLite consensus disorder prediction 917 936 - -
Sto7g2351 936 MobiDBLite consensus disorder prediction 242 275 - -
Sto7g2351 936 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 157 873 - -
Sto7g2351 936 Pfam FAR1 DNA-binding domain 199 302 IPR004330 -
Sto7g2351 936 MobiDBLite consensus disorder prediction 798 817 - -
Sto7g2351 936 Pfam SWIM zinc finger 688 713 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2351 Sto-Chr7 29090493 29099428 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g2351 FAR1 8e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2351 - - gmx:100817034 1425.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2351 7 29090493 29099428 Sto4g2428 4 25686515 25689833 CCT