Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2350 ATGTCTTTCTACGGCAAGGTCGACGAATCGGAACACGCGAAGCTCGAGTCTCTTCGAAAGGCCCGGCGCCGGCTCGCCGTGATAGTCCTGTCGGCGGTGGTCCTAGCGGGCGTTGTCGTGGCCGCTGTCTTAGGAACCACCTCGTCTCaccacaacaacaacaacaagaaTGGTGGTACTGATGGTAACGGGTCTGAGTCCGCCTCGGTAAAGGCAGTGTGTGATGTGACATTGCACAAGGAGGCGTGTTATAGAAGCATTGGGTCAGGACAAGGAGGGGATGTGACAATAATGAAGCCTGAAGAGTTGTTCAAGTTGTCCATTGAGGTGGCATTGAGTGAAGTGTCAAAGGTTGTTGATGGATACTTTTCTAATGATGATATTGTGAAGGACTTGTTTGGGAGTGATAATAGGAGTAGAGAGGCTTTTGTGAATTGTAAGGAGCTTTTGGGTCTTGCTGTGGATTATTTGAATGCTTCATTGGCTTCTTCTTCTGATGGGAAATCTTCACTTCTTGAGGTTTTTGAAGATCTCCAAACATGGCTCAGTGCTTCAGGAACATACCAGCAAACATGCATAGATGGGTTTGAGGAATCAAAAGAAACACTAAAAAACACCATCACAAACTACCTCAAGAACTCCACAGATCTCACCAGCAATAGTCTAGCCATCATCACATGGCTCAACAAGGCTGCaaccacacttaacttaagaagaCGCCTTCTCACTACCACCACTTTcccccatcatcatcatcatcatgatgaAGAAACACTAGCAGAAGCATCACTACCTTCATGGCTCCATCACAGGGAGAGGAAGCTGCTCCAAGTCCCAGACACAGAGCTGAGGAAGAGAGCAGACATAGTTGTGGCCAAAGATGGGTCAGGGAGATTCAGAACAATATCTGAGGCACTCAGGCATGTGCATGACAAGAATGAGAAGAGGACTGTGATCTATGTGAAGAAAGGGGTGTACTATGAGAATGTGAAGGTGGAGAAGACCAAGTGGAATGTTTTGGTCATTGGTGATGGAATGACTGCTACTATTGTCTCTGCTGGACTCAACTTTGTGGATGGCACTCCCACTTTCTCATCTGCAACTTTTGTCGTCGTGAGGGTATTCTTGAACATTTTTAGTAATGTTCGGATTTTTGTGTGCGTGAATGCAGCTGTTTTCGGGAGAAATTTCGTCGCGAGGGACATAGGGTTTCGCAACACGGCCGGGCCGGAGAAGCACCAGGCAGTGGCATTGATGACAAGTGCAGATCAAGCAGTGTTCTATAGATGCCACATTGATGCATTTCAGGACACTCTTTATGCTCATGCCCAACGCCAATTCTATAGGGAATGCAACATCTATGGCACAGTTGATTTCATCTTTGGCAATTCTGCAGTTATCATCCAAAACTGCAACATTCTTCCAAAGGTACCTATGAAGGGTCAGATGAACACAATCACAGCACAAGGGAAGATTGATCCAAACATGAACACTGGGATTTCAATTCAGAATTGCAATATCTCACCTTTTGGGAACTTAAGTTCAGTGGAAACATACCTTGGAAGGCCATGGAAGAATTACTCTACCACTTTGTATATGCAATCCTCAATGGGAGGCTTCATTCACCCTAGTGGATGGCTCCCATGGGTAGGAAACTCAGCACCAGACACCATTTTCTATGCTGAGTTTCAGAATTATGGACCTGGTGCTTCAACAAAAGATCGGGTCAAATGGAGAGGTCTGAGAAACATTAACGCCAGAGACGCTAATAGTTCTGCCTTGTGCTGTGATGGCATTCTTTTGGAATGGGAGTGGTTTTCTGGCATAGATGTTGCAGCCTTGGAAGACTACAGCTGCATTGCCAAATATGAAGTCTACTGTGCCATAGATGTCACATTCTCTGTAGAATTGCCTCAGGGAATGGGCATAGAGGGTGTCTTGGTACCCCTCGAAGCTGCACCGGTAGAAGGTCGAGAGGTCCGCGTTGTTCCTCACGGCCACCGCTTGGTGCTTCTCCGGGCCGGCCGTGTTCCGGAATGTGACATCCACTGCTATGAACCTTTCTCCAGAAACAGCTGA 2079 0.4545 MSFYGKVDESEHAKLESLRKARRRLAVIVLSAVVLAGVVVAAVLGTTSSHHNNNNKNGGTDGNGSESASVKAVCDVTLHKEACYRSIGSGQGGDVTIMKPEELFKLSIEVALSEVSKVVDGYFSNDDIVKDLFGSDNRSREAFVNCKELLGLAVDYLNASLASSSDGKSSLLEVFEDLQTWLSASGTYQQTCIDGFEESKETLKNTITNYLKNSTDLTSNSLAIITWLNKAATTLNLRRRLLTTTTFPHHHHHHDEETLAEASLPSWLHHRERKLLQVPDTELRKRADIVVAKDGSGRFRTISEALRHVHDKNEKRTVIYVKKGVYYENVKVEKTKWNVLVIGDGMTATIVSAGLNFVDGTPTFSSATFVVVRVFLNIFSNVRIFVCVNAAVFGRNFVARDIGFRNTAGPEKHQAVALMTSADQAVFYRCHIDAFQDTLYAHAQRQFYRECNIYGTVDFIFGNSAVIIQNCNILPKVPMKGQMNTITAQGKIDPNMNTGISIQNCNISPFGNLSSVETYLGRPWKNYSTTLYMQSSMGGFIHPSGWLPWVGNSAPDTIFYAEFQNYGPGASTKDRVKWRGLRNINARDANSSALCCDGILLEWEWFSGIDVAALEDYSCIAKYEVYCAIDVTFSVELPQGMGIEGVLVPLEAAPVEGREVRVVPHGHRLVLLRAGRVPECDIHCYEPFSRNS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2350 692 CDD PMEI-like_3 72 230 - -
Sto7g2350 692 Gene3D - 284 607 IPR012334 -
Sto7g2350 692 TIGRFAM PME_inhib: pectinesterase inhibitor domain 65 228 IPR006501 GO:0004857
Sto7g2350 692 Pfam Pectinesterase 288 372 IPR000070 GO:0030599|GO:0042545
Sto7g2350 692 Pfam Pectinesterase 378 589 IPR000070 GO:0030599|GO:0042545
Sto7g2350 692 PANTHER PECTINESTERASE 4 372 - -
Sto7g2350 692 PANTHER PECTINESTERASE 377 591 - -
Sto7g2350 692 PANTHER PECTINESTERASE 4 372 - -
Sto7g2350 692 PANTHER PECTINESTERASE 377 591 - -
Sto7g2350 692 Gene3D Invertase/pectin methylesterase inhibitor family protein 66 230 IPR035513 -
Sto7g2350 692 SUPERFAMILY Pectin lyase-like 286 588 IPR011050 -
Sto7g2350 692 SMART PMEI_2 65 224 IPR006501 GO:0004857
Sto7g2350 692 ProSitePatterns Pectinesterase signature 2. 453 462 IPR033131 -
Sto7g2350 692 Coils Coil 193 213 - -
Sto7g2350 692 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 228 IPR035513 -
Sto7g2350 692 Pfam Plant invertase/pectin methylesterase inhibitor 69 224 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2350 Sto-Chr7 29056703 29062450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2350 2 590 Carbohydrate Esterase AT3G10710 54.407 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2350 - - gmx:100808802 720.309