Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2335 ATGTATGCACGCGGTTGTTCTGGCTTTACCAAAGTGAACTACAAGAGCAAGTTGGATTCTAGTTCATCTTTTGTTGTTGCAACAGAGCAGAAAATTGGTGAGGAAGAacttgtgaagaagaagaaggaagatttTTGTAAGAGTCCACAGATCTTGAAACTCTATGAGTACTGTGAAACAAAGAATATTGTGTTCCATATAGAAGTGCTTGCAGGATCTTCTCCAGAAGTTGCTTCTAATGCTGCCAAGAATTTTAGGGCAACATGGTTGATACTTGATAGGCAGATGAACAAACACAAGAGACATTTCATGGAGAATCTGTCTTGTGGTATGTATAGGATAAGGAGTCACAGAGGCATTCAAAGGTTAAGAAAACCAAAACTCAGAGAAAACACCAAATCACTTGCTCAAAGATCAGATCAGGTAACATATATGGAAATGATTCCAGGAAGCTCAGAGGAAGAATTTTCTCTTAAGAGGCCTAGATCATCATTATCAAATGAGCAGCTAATGGCAGCTGCAGTTTCAACTCTTCAAAATTCCAAGGCCTCAAATTCAAAACACAAAGAGGAAGAAAATCCTCCAAAGCTTAAACACAAAACAACAGAGAAAAAGAAGCATTCAGTACTATACATTTCTGAGAGTAAAGAAACAGAAGTGCATCTTCATGTGCAACAAGAATTTGAGACATTGAAGGAAGAGTTTGCAAACTCAATTTGCTCGGTATGCGAAAACAAAAGGCCGAAGATCGGATGGAAGAGAGACTTCAGTTACTCGGAGCTTTACACGGCCACACATGGATTTTCCCAGAAGAACTTTCTATCAGAAGGCGGGTTTGGATCGGTGTACAAAGGGCAGCTAGATGGAATGGCAATTGCTGTTAAGCAACACAAATGTGCAAGCCTTCAAGGAGAGAAGGAGTTTAAGTCTGAGGTGAATCTACTTAGCAAAGCAAGACATGAGAATGTGGTCATGTTGTTAGGATCATGCTCAGAAGGAAATAATAGGCTTCTAGTTTACGAATACGTATGCAATGGTTCGTTGGATCAACATCTATCACAACATTCTCGAGCTGTTCTTAGTTGGGAAGACAGGATTAAAGTAGCTATTGGATCTGCCAAAGGATTATTATACTTGCATAAGAACAACATCATACACAGAGATATGAGGACAAATAACATCCTCATAACACATGATTATCAACCCCTGagTCATTCTATGCTTGGCTCAAGTATGAGTCATGTTGAGCACTTCTCCAAATTGTATTTGGACATACCTATGCACGTGTCTTATGCCTGTCTACCGTGTGTTATGCTGGGAGACTTTGGTTTAGCAAGAAGTCAACATCAAGACTCGATACACTCGACCGAGGTTGTCGGGACTCTGGGGTATTTAGCACCGGAATATGCAGAATGTGGAAAAGTGTCAACCAAGATAGATGTGTATTCTTTTGGTGTAATCCTACTGCAGCTAATAACTGGAATGAGGATCACAGACCAAAGACTTGAAGGGAGAAGCCTTGTGGGATGGGCAAGACCACTATTAAGAGAGAGGAACTATCCAGAGTTAATTGACCAAAGGATCATAAATTCTAATGATTTTCATCAACTATTTTGGATGGTTCGAATAGCCGAAAAATGTCTAAGCAGGGATCCCCACAAGAGATTAACTATGATTTCAGTGGTTGAAGCTTTAACTCACATCGTGGATGGCCAAATATGTGGGATCATAAGCAGAGACATTTCCTTTGTGAGGTCAGAGTCATTATATGATTCATCAGACACAGACACAGACACAGATGGATCATCAGAAGATGAGATGAACAAGTCAGAAGGTGAGATAGAAAGTCCTGATAAAGAGTTCAATGCAACATCAAATAGTAGCATGAGTCACATGATTTCAGGACTCCCAATCCCACCATCCCCTCCAATGGATACCACTTCCTCATGTAGGTATGCTTACCCCAAATTCCCTCACTTatttccatcttcttcttcttcttctttgcttCGATCTTTCCCTTATGCCCTGATTCTCAACTTCCGTATTCATTCCCATCCCCCAAATCCCAATACCATCCACCATGATGTCGCTTCTTTCAATAGCTTGCTCCTTATGCGTCCCCCGCCCTCCATTTTCCAAATTACTAAGGTTTTAGGATCAATTGCTAAGAAGAAACATTATGCCGCTGCTGTTTCACTCTGGACACGAGCAAAATCCAAGGGATTCATGCCATCTTTTGTTACTCTGAGCATTTTGATGAATTGTTACTGTCATATGGGTCAGATGGCTTTTGCTTTCTCTATATTGGGGAAGATTCTCAAGAACGGTAATCAACCCAATGTCATTACTTTGAATACACTAATGAAAGGACTCTGCATGAATAATAAGGTTAGAGAAGCATTAGATTTTCACGATGGTCTAATGGCAAAAGGATTTCGGTTAGACGAAGTTAGTTACGCCACCTTAATCAATGGACTATGTAAAACTGGACACACAGGAGCTGCAATTAAATTGCTGCTATCGATGAAGAAGAGACAAGTAGTCAAGCCTGATTTAGTCATCTACAGCACAGTCATACATGGTCTGTGTAAGGATGGATTGGTACACGAGGCACGTGATTTGTGTGATGAAATGATTGATTTGGGTATTTCTCCAAATATTGTCACTTACACCACTCTAATCCATGGTTTTTGCAGCATTGGTCAATGGCAAGAAGTAACTAGATTGCTAAATGAAATGGCATTGAAAAGCATCATCCCAAATGTTCATACCTTTAATGTACTGGTTGATGCATTTTGTGTAGAAGGAAGGATCATGGAAGCACAGGCAATATTTGTTATGATGATGAAGTGTGGTCGAAAGCCTGATGTTTTTAGCTACACTGCTCTAATGGATGGGTATTGTTTGATCAACAATGTCAATGAGTCAATGGAAGTATTCAACACGATGGTGAGAAGTGGCTTGACACCTGATGTTACCATTTATAGCATCCTGATCAATGGATACTGTAAAATTAATTGTGTGAACGAAGCTTTGGATCTTTTTAAAGAGATGCGTTGTAAAAATCTGGTTCCTAACACCGTAACCTATAGTTCTCTTATTGATGGCTTATGCAAATCTGGGAGAATCTCATATGCCCAAGATCTTATTTATGAGATGCATGACCGTGGTCATCCCCCTAAtatatttacttacaatatcGTGTTGGATGCATTTTGTAAAAGACAATATCTCGACGGGGCGATTGAATTATATAAGCTCATCAATGATCAAGGTATTCAACGCGATTTGTGCACTTACAATACACTTATTGATGGTTTGTGCAAAGGTGGGAGACTAAGTACTGCATGGGAGATTTTTCAGCACCTTTTGATCAATGGCCCTTTTCCAGATGCTTGGACGTATAACATTATGATCCATGGTCTTTGTAAAGAAGGCCTGTTTGATGAAGCGATTTCCTTGCTTTATAAAATGAAGCAAAATGGCGTCCTCCCAAGTTTAGTAACATTTGATACACTTATCGGATTTTTTCTGAAAAACAACAAGAATGATGACGCAGAGAAACTTCATCTTGACATGATATCCAGAGggctattaaaaaaatag 3609 0.3882 MYARGCSGFTKVNYKSKLDSSSSFVVATEQKIGEEELVKKKKEDFCKSPQILKLYEYCETKNIVFHIEVLAGSSPEVASNAAKNFRATWLILDRQMNKHKRHFMENLSCGMYRIRSHRGIQRLRKPKLRENTKSLAQRSDQVTYMEMIPGSSEEEFSLKRPRSSLSNEQLMAAAVSTLQNSKASNSKHKEEENPPKLKHKTTEKKKHSVLYISESKETEVHLHVQQEFETLKEEFANSICSVCENKRPKIGWKRDFSYSELYTATHGFSQKNFLSEGGFGSVYKGQLDGMAIAVKQHKCASLQGEKEFKSEVNLLSKARHENVVMLLGSCSEGNNRLLVYEYVCNGSLDQHLSQHSRAVLSWEDRIKVAIGSAKGLLYLHKNNIIHRDMRTNNILITHDYQPLSHSMLGSSMSHVEHFSKLYLDIPMHVSYACLPCVMLGDFGLARSQHQDSIHSTEVVGTLGYLAPEYAECGKVSTKIDVYSFGVILLQLITGMRITDQRLEGRSLVGWARPLLRERNYPELIDQRIINSNDFHQLFWMVRIAEKCLSRDPHKRLTMISVVEALTHIVDGQICGIISRDISFVRSESLYDSSDTDTDTDGSSEDEMNKSEGEIESPDKEFNATSNSSMSHMISGLPIPPSPPMDTTSSCRYAYPKFPHLFPSSSSSSLLRSFPYALILNFRIHSHPPNPNTIHHDVASFNSLLLMRPPPSIFQITKVLGSIAKKKHYAAAVSLWTRAKSKGFMPSFVTLSILMNCYCHMGQMAFAFSILGKILKNGNQPNVITLNTLMKGLCMNNKVREALDFHDGLMAKGFRLDEVSYATLINGLCKTGHTGAAIKLLLSMKKRQVVKPDLVIYSTVIHGLCKDGLVHEARDLCDEMIDLGISPNIVTYTTLIHGFCSIGQWQEVTRLLNEMALKSIIPNVHTFNVLVDAFCVEGRIMEAQAIFVMMMKCGRKPDVFSYTALMDGYCLINNVNESMEVFNTMVRSGLTPDVTIYSILINGYCKINCVNEALDLFKEMRCKNLVPNTVTYSSLIDGLCKSGRISYAQDLIYEMHDRGHPPNIFTYNIVLDAFCKRQYLDGAIELYKLINDQGIQRDLCTYNTLIDGLCKGGRLSTAWEIFQHLLINGPFPDAWTYNIMIHGLCKEGLFDEAISLLYKMKQNGVLPSLVTFDTLIGFFLKNNKNDDAEKLHLDMISRGLLKK 1202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2335 1202 MobiDBLite consensus disorder prediction 590 644 - -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1027 1061 IPR002885 -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 992 1026 IPR002885 -
Sto7g2335 1202 Gene3D Tetratricopeptide repeat domain 918 1005 IPR011990 GO:0005515
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 922 956 IPR002885 -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 816 850 IPR002885 -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1132 1166 IPR002885 -
Sto7g2335 1202 MobiDBLite consensus disorder prediction 619 634 - -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 887 921 IPR002885 -
Sto7g2335 1202 Gene3D Tetratricopeptide repeat domain 1006 1125 IPR011990 GO:0005515
Sto7g2335 1202 Gene3D Tetratricopeptide repeat domain 846 917 IPR011990 GO:0005515
Sto7g2335 1202 Gene3D Tetratricopeptide repeat domain 1126 1197 IPR011990 GO:0005515
Sto7g2335 1202 MobiDBLite consensus disorder prediction 184 199 - -
Sto7g2335 1202 ProSitePatterns Tyrosine protein kinases specific active-site signature. 384 396 IPR008266 GO:0004672|GO:0006468
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1062 1096 IPR002885 -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 746 780 IPR002885 -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1167 1201 IPR002885 -
Sto7g2335 1202 PANTHER OS10G0495100 PROTEIN 688 1200 - -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 995 1028 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 959 993 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 854 888 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 1135 1167 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 1029 1063 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 889 923 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 818 852 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 783 817 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 1064 1097 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 748 782 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 924 958 IPR002885 -
Sto7g2335 1202 TIGRFAM PPR: pentatricopeptide repeat domain 1099 1132 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat 1057 1086 IPR002885 -
Sto7g2335 1202 Gene3D Phosphorylase Kinase; domain 1 240 342 - -
Sto7g2335 1202 Pfam Protein tyrosine and serine/threonine kinase 271 565 IPR001245 GO:0004672|GO:0006468
Sto7g2335 1202 Gene3D Transferase(Phosphotransferase) domain 1 343 575 - -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1097 1131 IPR002885 -
Sto7g2335 1202 SUPERFAMILY Protein kinase-like (PK-like) 253 575 IPR011009 -
Sto7g2335 1202 MobiDBLite consensus disorder prediction 176 206 - -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 781 815 IPR002885 -
Sto7g2335 1202 Gene3D Tetratricopeptide repeat domain 693 845 IPR011990 GO:0005515
Sto7g2335 1202 MobiDBLite consensus disorder prediction 602 618 - -
Sto7g2335 1202 ProSiteProfiles Protein kinase domain profile. 268 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2335 1202 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 688 1200 - -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 957 991 IPR002885 -
Sto7g2335 1202 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 852 886 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat family 991 1040 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat family 780 829 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat family 851 900 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat family 921 969 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat family 1097 1145 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat 748 777 IPR002885 -
Sto7g2335 1202 Pfam PPR repeat 1169 1199 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2335 Sto-Chr7 28900238 28911455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2335 1029 1200 Glycosyltransferase AT1G05670 25.862 8.63e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Sto7g2335 PK_Tyr_Ser-Thr 6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2335 - - gsj:114417376 659.833