Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2322 ATGGCACCAATTGGCTTACTGTTTTCTGTATTAAACTATGGAATGTTGGCTGATTGGACAGCTTTCACTGACATCATGGCTCGGATAAAAAAGATAATGCAAGCAGATGAGGATGTTGGGAAAATAGCATTAGCAGTGCCTGTTTTAGTTTCTAAAGCTCTAGAGCTGTTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAGAGAGGAGCAAAGACCATGAATGCTCTGCATTTGAAGCATTGTGTACAAAGCTATAATGTCTTTGATTTTCTGAGGGATGTTGTCAGCAGGGTTCCTGACTATGGTCACGGTCATGGCCATGGTCATGGTCATGGTCATTCTGAGACTGGTACTGATGATCGGGTCCTTCCAAGGAGAAGGAAAGCAGCAAATGATGATTACAATGATAGTGATGAAGAAACCAAGAGGAGCAAGATGCATGAGTTGAGCCATACTGGCACTACTGGTAGGGGAAGAGGTCGAGGAAGAGGGAGAGGGCGTGGTCGAGGGGCTCGAAATGtcgaaagagaaagagagacccATCATCATGAGGCCGAATCTGAGCCGTGCACTTCTGTTCCGAACAGCAGCATTCAAAATCCTAATACAAATGTGGCGATGGATAATGATTCCGAGCCAAAGGATTTACCGAAGGAAACTAATGCAAATCCCGATGAAGGTGCTCAGTCCCTTCGTAACATCGATCTGAACGCCAACCTGAATGAAAACGAGGAGAAAAATGTGAGCACGGCGGTAGTAGCTCAAGCCCCCTTGCCTGATCCTCCAACTGAGACCGAGACTAAGCATGAAGAAATCCCAGGCTGGTCTCTCTCTGATGTAGACAAGATGGCCATTGACACTATGCAGCTTGCACACTTTGGTAGACAAATAGAAGAGGATGAAGAAGATTATGATGAAGAAGGGTAA 939 0.4398 MAPIGLLFSVLNYGMLADWTAFTDIMARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGHGHGHSETGTDDRVLPRRRKAANDDYNDSDEETKRSKMHELSHTGTTGRGRGRGRGRGRGRGARNVERERETHHHEAESEPCTSVPNSSIQNPNTNVAMDNDSEPKDLPKETNANPDEGAQSLRNIDLNANLNENEEKNVSTAVVAQAPLPDPPTETETKHEEIPGWSLSDVDKMAIDTMQLAHFGRQIEEDEEDYDEEG 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2322 312 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 26 86 IPR003958 -
Sto7g2322 312 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 27 311 - -
Sto7g2322 312 MobiDBLite consensus disorder prediction 172 192 - -
Sto7g2322 312 PANTHER HISTONE SUPERFAMILY PROTEIN 27 311 - -
Sto7g2322 312 SUPERFAMILY Histone-fold 33 102 IPR009072 GO:0046982
Sto7g2322 312 MobiDBLite consensus disorder prediction 105 158 - -
Sto7g2322 312 Gene3D Histone, subunit A 25 101 IPR009072 GO:0046982
Sto7g2322 312 MobiDBLite consensus disorder prediction 193 213 - -
Sto7g2322 312 MobiDBLite consensus disorder prediction 105 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2322 Sto-Chr7 28767659 28770580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2322 27 301 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.477 4.16e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Sto7g2322 CBFD_NFYB_HMF 1.2e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2322 K21752 - gmx:100814712 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2322 7 28767659 28770580 Sto7g2322 7 28767659 28770580 ECH