Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2289 ATGGTTGCGATTTCGCTACATAACCTAAGTGTATTTTCATTGGCTCTCATGAGAAGTTGTAATGCAAGGATTGTGACTGAGTTGAATAGAACCAGGGTTGCTGAAGAAGATGAGAAGGGAGCAGCAAGAGGGATGCCGAGCTTCGATTCTCAATCACCCGCTATGAGTAGCATAGAAGCACACTTAGGTTTACCGTCTCATGGTTATGGTATAACAATGGTGGATTTGCAAGTACAATGCTATACTGAGGGTAGCACAGTTGATTCTTTTCGTGTTTCTGACTTTGGAGCATTTGATCAACGAGTTGGATATCGAATAGAGGATGCTGTAGGCCTGAGTGGAAACTCAGTTTTAAACTCATTAAAAGTAAGTACTCAAACAATTTCTCCTGGTCCTGTTCGCACTGGTACTGTTGATAAGTTTCCAACCTCAATCAATAAAGACCCATCAGCCAACCAAGTAGAGTCACAAACATTGCAATTGCAAAAGGTCCCATCATCTAATCTGGTAACCATTTCAAGTGGTAATACAGAGAACCAGGAAGAGGCTTCCATGGCTGATGCAAGTCCTAGGACTGACATCTCTACAGATGATACTGATGACAAGAATCAGCAGTATGATAGAAATCAAACCCTTGCTGCTGCGGCTTCTGACTCCAGTGACAGATCAAAGGATAAAACAGATCAGAAGACTCTCCGCAGGCTTGCTCAGAATCGTGAGGCTGCAAGGAAAAGCCGGTTGAGAAAGAAAGCCTATGTCCAACAGTTGGAAAGCAGTCGATTGAAGTTGACCCAACTAGAGCAAGAACTTCAGCGTGCTAGGCAGCAGGGAATCTTCATATCAAGCTCAGGTGATCAAACACATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATATGCAAGGTGGCTTGAAGAGCAGAATCGCCAAATTAATGAGCTAAGAGCAGCTGTAAATTCTCATGCAAGTGATACGGAACTCCGTATTATCGTGGATAACATATTGGCACACTATGATGAAATATTTAAGCTGAAGGGTGTTGCGGCTAAGGCTGATGTTTTTCATTTGTTGTCTGGCATGTGGAAAACACCTGCAGAGAGGTGTTTTCTATGGCTTGGTGGTTTTCGATCATCTGAGCTCCTCAAGCTCCTGGTAACCCAATTGGAACCTCTAACAGAGCAGCAGGTTGTCGGCATTACTAACTTGCAGCAATCCTCTCAACAGGCAGAAGATGCATTATCTCAGGGTATGGAAGCATTGCAACAGTCCCTAGCTGAGACATTGTCTAGTGGATCTCTGGGCTCATCTGGTTCATCAGGGAATGTGGCAAATTACATGGGCCAAATGGCTATGGCCATGGGTAAGCTGGGAACACTTGAGGGTTTTATTCGACAGGCTGACAATCTGCGGCAGCAAACACTGCAACAAATGCACCGGATATTGACAACACGCCAATCGGCTCGTGCACTCCTTGCAATACATGATTATTTCTCTCGGCTACGTGCTCTCAGTTCTCTCTGGCTGGCCCGCCCAAGAGAATGA 1548 0.4483 MVAISLHNLSVFSLALMRSCNARIVTELNRTRVAEEDEKGAARGMPSFDSQSPAMSSIEAHLGLPSHGYGITMVDLQVQCYTEGSTVDSFRVSDFGAFDQRVGYRIEDAVGLSGNSVLNSLKVSTQTISPGPVRTGTVDKFPTSINKDPSANQVESQTLQLQKVPSSNLVTISSGNTENQEEASMADASPRTDISTDDTDDKNQQYDRNQTLAAAASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYARWLEEQNRQINELRAAVNSHASDTELRIIVDNILAHYDEIFKLKGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVTQLEPLTEQQVVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGSLGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPRE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2289 515 SMART brlzneu 226 289 IPR004827 GO:0003700|GO:0006355
Sto7g2289 515 Pfam bZIP transcription factor 230 270 IPR004827 GO:0003700|GO:0006355
Sto7g2289 515 MobiDBLite consensus disorder prediction 126 232 - -
Sto7g2289 515 Coils Coil 249 276 - -
Sto7g2289 515 Gene3D - 229 281 - -
Sto7g2289 515 CDD bZIP_HBP1b-like 230 282 - -
Sto7g2289 515 Pfam Seed dormancy control 312 387 IPR025422 GO:0006351|GO:0043565
Sto7g2289 515 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 109 515 - -
Sto7g2289 515 Coils Coil 306 326 - -
Sto7g2289 515 PANTHER TRANSCRIPTION FACTOR TGA9 109 515 - -
Sto7g2289 515 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 233 248 IPR004827 GO:0003700|GO:0006355
Sto7g2289 515 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 272 IPR004827 GO:0003700|GO:0006355
Sto7g2289 515 ProSiteProfiles DOG1 domain profile. 295 512 IPR025422 GO:0006351|GO:0043565
Sto7g2289 515 MobiDBLite consensus disorder prediction 126 192 - -
Sto7g2289 515 SUPERFAMILY Leucine zipper domain 230 273 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2289 Sto-Chr7 28436449 28443133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2289 185 515 bZIP Transcription Factor Family AT3G12250 80.723 0.0 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sto7g2289 DOG1 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2289 K14431 - gmx:100101881 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2289 7 28436449 28443133 Sto7g2289 7 28436449 28443133 ECH