Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2287 ATGGCTCCTAAACAACCAAGTACGGGTCTGTTTGTGGGATTGAACAAAGGGCATGTAGTGACCAAGAAGGAATTGGCTCCACGCCCCTCAGATCGCAAAGGGAAAACTAGCAAGCGTGTTCATTTTGTGAGGAACCTGATTCGTGAGGTTGCGGGGTTTGCTCCTTATGAAAAAAGGATAACTGAGCTTTTAAAAGTTGGGAAGGACAAGCGAGCTCTGAAAGTTGCGAAGAGAAAGTTGGGAACCCATAAGAGGGCTAAGAAGAAGCGTGAGGAGATGTCAAATGTTCTCCGAAAGATGAGGGCTGGTGGAGCTGCAGACAAGAAGaaCTGTGGGTCCCACACTTCGAGCTCCGGCGGGTCGTGTGGGCCGGTGATCGAGGTTGGGGTGCATCCGGGATTGAAATTGCTGCGGCAAGTAGGGGAAGGGAGGAGGGCCGGTATGGAAACGTGGACGGCGGTGATCGCCGGCGCCGGCGGTTGCAAGCACCAGGTGGCCGTGAAGAAGGTAGGAATAGTGGAGGAGATGAATTTGGATTGGGTTCAAGGGCAGCTTGAGAATTTGCGTCGTGCTTCAATGTGGTGTAGAAATGTGTGCACTTTTCATGGAGCAGTTCGGGAGGATGAGAGTTTGTGTCTTGTGATGGATCGCTGTTATGGATCGGTTAAATCTGAGATGCAGCGCAATGAAGGAAGGCTTACTTTGGAGCAAGTCCTAAGATATGGGGCAGACATTGCACGAGGGGTGTTGGAGCTTCATGCTGCTGGTGTTGTTTGCATGAATCTAAAGCCGTCCAATTTTCTTCTTAATGCAAACGGTCATGCGGTGGTTTCTGATTATGGACTTGCTGCAATTTTAAAGAAGCCTTCCTGTTGGAAGGCCAAGCCAGAGTCTGACTCCTTCAAGATCCATTCCTGTATTGAATGTATAATGCTCAGCCCACATTACACAGCTCCAGAGGTTTGGGAACCTGTGAAGAAGTCGTTAAATTTGTTCCGGGATGATGCAACAGCCGTATCTGCAGAGTCAGATGCTTGGAGTTTTGGTTGTGCTTTGGTGGAAATGTGCACGGGTTTTGCACCTTGGGCTGGTTTAAGTGCAGAGGAAATATATCAAGCTGTTGTCAAGGCACGGAAATTGCCTCCCCAGTATGCTAGTGTTGTTGGTGGTGGAATACCTAGGGAATTGTGGAAGATGATCGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGACCTAGTTTTAATTCAATGTTAGCAATATTTCTCCGCCATTTGCGGGAAATACCATGCAGTCCTCCTGCAAGCCCTGATAATGATTCTGTTAAGTGCTCTGTGCCAAATGTGATGGAGGCTTCTCCAGCGCCTCAGTTGGAAGCTCCTCAGGATTATGCAAACCATCTTCATCGACTTGTGTCTGAAGGGAATGTTAGAGGTGTTAGGCATCTTCTTGCAAAGGCTGTATCAGTGAATGGTAACAACTACATATATTCTCTATTGGAAGCTCAAAATGCTGATGGGCATACTGCTCTCCACTTGGCTTGTAGACGTGGTAGTGCAGAGCTTGTTGAGGCCATTTTGGCATGCAAAGAGGCAGATGTTGATGTCTTGGACAAAGATGGATCTCCTCCCCTTGTTTTTGCTTTAATAGCTGGTTCTCCAGAGTGTGTTCGCTGTCTTATCAAAAGAAATGCTAATGTGAGGTCTCGGTTGAGAGATGGCTTTGGCCCATCTGCTGCTCACATCTGTGCCTATCATGGCCAACCGGATTGCATGCGAGAACTATTATCGGCTGGAGCTGATCCAAATGCAGTCGATGATGAAGGCGAATCTGTACTGCATTGTGCAGTTGCAAAGAAGTATACAGACTGTGCCCTTGTGATATTAGAAAATGGGGGCTGCAGATCAATGGCCATCTTAAATTCAAAGAATCAAACACCACTGCACTTCTGTGTGGAAACATGGAATGTGGCTATTGTACGAAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTAACATACCAAGCCCTATTGGCACTGCATTGTGCATGGCAGCTGCATCTAAGAGAGACCATGAAATTGGTGCAGACCCATCTGCTCAAGATTCGCAGTATGGGCGGACAGCTTTGCATACAGCTGTTATATCTAATGATGTCGATATGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGTAATGAGCAAAACCTTACACCTCTTCACATAGCTTTAGTTAGTGGGGCAAAGTCATGTGTTAAGTTGCTTCTATCTGCTGGGGCAAATTGCAATTTGCAGGATGATGAGGGTGACAATGCTTTTCATAAAGCAGCAAAGACAGCAAGAATGGCACGTGAAAACCTTGACTGGCTTATTGTTATGCTAAGGAATCCTGAAGCTGATGTTGAAGTCAGAAACCACAGGCAAGTAGAAGCCAAAGCCTAG 2460 0.4679 MAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAADKKNCGSHTSSSGGSCGPVIEVGVHPGLKLLRQVGEGRRAGMETWTAVIAGAGGCKHQVAVKKVGIVEEMNLDWVQGQLENLRRASMWCRNVCTFHGAVREDESLCLVMDRCYGSVKSEMQRNEGRLTLEQVLRYGADIARGVLELHAAGVVCMNLKPSNFLLNANGHAVVSDYGLAAILKKPSCWKAKPESDSFKIHSCIECIMLSPHYTAPEVWEPVKKSLNLFRDDATAVSAESDAWSFGCALVEMCTGFAPWAGLSAEEIYQAVVKARKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPSFNSMLAIFLRHLREIPCSPPASPDNDSVKCSVPNVMEASPAPQLEAPQDYANHLHRLVSEGNVRGVRHLLAKAVSVNGNNYIYSLLEAQNADGHTALHLACRRGSAELVEAILACKEADVDVLDKDGSPPLVFALIAGSPECVRCLIKRNANVRSRLRDGFGPSAAHICAYHGQPDCMRELLSAGADPNAVDDEGESVLHCAVAKKYTDCALVILENGGCRSMAILNSKNQTPLHFCVETWNVAIVRRWVEVATSDEIAEAINIPSPIGTALCMAAASKRDHEIGADPSAQDSQYGRTALHTAVISNDVDMVKVILAAGVDVNIRNEQNLTPLHIALVSGAKSCVKLLLSAGANCNLQDDEGDNAFHKAAKTARMARENLDWLIVMLRNPEADVEVRNHRQVEAKA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2287 819 MobiDBLite consensus disorder prediction 101 120 - -
Sto7g2287 819 SUPERFAMILY Ankyrin repeat 571 785 IPR036770 -
Sto7g2287 819 ProSiteProfiles Ankyrin repeat profile. 741 773 IPR002110 GO:0005515
Sto7g2287 819 ProSiteProfiles Ankyrin repeat profile. 708 740 IPR002110 GO:0005515
Sto7g2287 819 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Sto7g2287 819 ProSiteProfiles Ankyrin repeat region circular profile. 505 538 - -
Sto7g2287 819 ProSiteProfiles Ankyrin repeat region circular profile. 741 773 - -
Sto7g2287 819 SUPERFAMILY Ankyrin repeat 464 573 IPR036770 -
Sto7g2287 819 Pfam Ankyrin repeats (3 copies) 580 658 IPR002110 GO:0005515
Sto7g2287 819 Pfam Ankyrin repeats (3 copies) 698 772 IPR002110 GO:0005515
Sto7g2287 819 Pfam Ankyrin repeats (3 copies) 469 567 IPR002110 GO:0005515
Sto7g2287 819 Pfam Protein kinase domain 162 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2287 819 Gene3D - 573 747 IPR036770 -
Sto7g2287 819 Gene3D Transferase(Phosphotransferase) domain 1 182 424 - -
Sto7g2287 819 SUPERFAMILY Protein kinase-like (PK-like) 162 425 IPR011009 -
Sto7g2287 819 SMART ANK_2a 741 770 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 774 805 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 607 638 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 574 603 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 708 737 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 642 673 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 462 491 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 539 568 IPR002110 GO:0005515
Sto7g2287 819 SMART ANK_2a 505 535 IPR002110 GO:0005515
Sto7g2287 819 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto7g2287 819 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 107 813 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Sto7g2287 819 Gene3D - 748 800 IPR036770 -
Sto7g2287 819 ProSiteProfiles Protein kinase domain profile. 134 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g2287 819 ProSiteProfiles Ankyrin repeat region circular profile. 708 740 - -
Sto7g2287 819 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Sto7g2287 819 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Sto7g2287 819 PRINTS Ankyrin repeat signature 506 521 IPR002110 GO:0005515
Sto7g2287 819 PRINTS Ankyrin repeat signature 757 771 IPR002110 GO:0005515
Sto7g2287 819 ProSiteProfiles Ankyrin repeat region circular profile. 574 606 - -
Sto7g2287 819 ProSiteProfiles Ankyrin repeat profile. 505 538 IPR002110 GO:0005515
Sto7g2287 819 Gene3D - 449 572 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2287 Sto-Chr7 28399656 28419186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2287 1 109 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 81.081 1.08e-51 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Sto7g2287 Pkinase 2.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2287 K16279 - gmx:100777576 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2287 7 28399656 28419186 Sto7g2287 7 28399656 28419186 ECH