Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2195 ATGGATTCAGGCTCACCATACCAATGGCTTAGAGAGTTCAGATGGGACAACAATGGAGGCTTAAACCCTTTCTCCCTCCTTCTAGACTGTGCAAAATTTGTAGCCTCAGGAAGCATCAAGAATGCAGACATAGGCCTTGAGTACATCTCCCACTTGGCTTCTCCTGATGGTGATGCAGTTCAAAGGATGGTCACATACTTCAGTGAAGCCCTAGCCTTCAGAATAGTGAAGCACTTACCAGGTGTTTACAAAgccatcaaatcctccaaatCAACCTCACCTGCTTCTTCACACCAAATCCTCCTCCAAAAGTACTTCTTTGAGCTTTGCCCCTTCCTCAAGCTAGCCTACTTGACCACGAACCGGGCCATCGTCGAATCCATGGAAGGCGAAAGGCTAGTACACATCATAGATCTCCATTGCTCTGAGCCTGCTCAGTGGATTGACCTATTGATGACCCTGAAGAAACTCCCAGAAGGGCCTCCTCACTTGAAGATCACAGGGATTCATGAGAAGAAAGAGGTTTTGGACCAAATGGGGTTTCATTTGACAAGTGAGGCAGGAAAATTGGACTTcccttttcaattttatcccatTGTGAGCAAATTGGAGGACCTTGATGTGGATAACTTGCCTGTCAAGTCAGGTGAAGCACTTGCCATAAGTTCAGTTCTTCAGCTCCATTCCCTCCTCGCTACCGACGACGAAACaacaacatcatcatcatcatcatcgcgAAATTCCCCGGCCGGGCCGATGAATTTGCATCACCGGGTGGTCCATCAGCAGAGGACTTTTGCAGAATGGCTAGAGAAGGACATGATCAATTCTTCTGCATACATGTCTCCTGATTCAGCACTCTCACCACTCTCCCTCAGTGCTTCACCTAAAATGGGGATGTTCTTGAACTCCCTAAGGAAACTTCAGCCCAAACTAATGGTGATCACTGAGCAAGAATCAAACCTAAATGGCTCAAATAATCTTCTGGAAAGGATTGAGAAGGCACTGTACTTCTATAGCCCATTGTTTGACTGTTTGGACTCCACTGTTTCAAGGAGTTCATTGGAGAGGCAGAAGCTTGAGAGTGAGATGCTTGGGGAGGAGATAAAGAGGATCATTGCATGTGAAGGGTTTGAGAGGAAGGAGAGGTATGAGAAGCTTGAGAAGTGGATTCCAAGGATGGAAATGGCAGGGTTTAGGAAGGTACCTTTGAGCTATTATGGGATGTTGCAAGCAAAAAGGGTATTGCAGAGTTATGGACTAACAAAACCCAAAATAGAGGACCTAGAAATGAGAGACAGAAACATTGTATTCCACAACAGCATTTCCCGATTTAGGATCAAACCAAACAGTCTTAGCCAAAGCAAAACCTCTTGCAAATCGAAACACCCCACTCCCTCCAACAATTGCCATTTCTCTCACATCTTCAAACACAGCGTTCCTCCCAACGACACTCAATGTGCTTCCTTTGTAAATCCCTTCAGTGAAGGCATAATTCATCACCATCAGCAATCCGAAGTCGTTTTGGGGCTGAGAAGCGATGGCATACATTCCCTGGGCCCTACCCACCAGCCTCGAGCTTGGGCCTGGGCCTTCCGTAAGGGGGTCGTCCGTCATGAAGGTGGTTCCGAAGGAACTTGGGCCTTTTTGTGGGCTTATGATTCTCACGGCACTTGGGCTTGGCCCATCCAGGATGTCGTGGAAGAAGAAGTGGAGGTGTGTGGTTTTCTCCATGCGGGTTGTGGTGGCTAA 1752 0.4555 MDSGSPYQWLREFRWDNNGGLNPFSLLLDCAKFVASGSIKNADIGLEYISHLASPDGDAVQRMVTYFSEALAFRIVKHLPGVYKAIKSSKSTSPASSHQILLQKYFFELCPFLKLAYLTTNRAIVESMEGERLVHIIDLHCSEPAQWIDLLMTLKKLPEGPPHLKITGIHEKKEVLDQMGFHLTSEAGKLDFPFQFYPIVSKLEDLDVDNLPVKSGEALAISSVLQLHSLLATDDETTTSSSSSSRNSPAGPMNLHHRVVHQQRTFAEWLEKDMINSSAYMSPDSALSPLSLSASPKMGMFLNSLRKLQPKLMVITEQESNLNGSNNLLERIEKALYFYSPLFDCLDSTVSRSSLERQKLESEMLGEEIKRIIACEGFERKERYEKLEKWIPRMEMAGFRKVPLSYYGMLQAKRVLQSYGLTKPKIEDLEMRDRNIVFHNSISRFRIKPNSLSQSKTSCKSKHPTPSNNCHFSHIFKHSVPPNDTQCASFVNPFSEGIIHHHQQSEVVLGLRSDGIHSLGPTHQPRAWAWAFRKGVVRHEGGSEGTWAFLWAYDSHGTWAWPIQDVVEEEVEVCGFLHAGCGG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2195 583 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 4 439 IPR005202 -
Sto7g2195 583 Pfam GRAS domain family 25 422 IPR005202 -
Sto7g2195 583 PANTHER TRANSCRIPTION FACTOR GRAS, SCARECROW-LIKE PROTEIN 3-RELATED 4 439 - -
Sto7g2195 583 ProSiteProfiles GRAS family profile. 14 457 IPR005202 -
Sto7g2195 583 Coils Coil 315 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2195 Sto-Chr7 27576868 27581597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2195 1 428 GRAS Transcription Factor Family AT1G50420 50.583 1.84e-144 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto7g2195 GRAS 7.5e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2195 - - gmx:100779726 570.466