Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2178 atgggaagaagaaatggaggaAGGTCACTGCAAGAAATTCTGCGTCGTCGTCTCGAGACCTGCAAATCCAGGTACTCAACTATTGATGAAATCGTGAACCATCTTCGCTCAAATTACCCTGATTATCAGCGAACAAAGCACCAAACTCTGTCTCGATTTGTTCAACAAGCTTTGGAATCATCCAAGCAGTTGAACAGAAAACCTAGTACTCCTGTATTGAAGCACGACACCTCAGAAGATGACGAAGAGGGTCGAAGTGCGTCTCGGAAGAGGCCGAAGAAATTGGATGATAGTGAAGAGAGATTGCAAAAAATGGAGAATCTACACCTTAGAAGGTTACAGAGGGATCAGAGCAATACTGCAACGTCTTCTGCTTCAACTTCTAGTCCATCATCGTCGGAGGTGTCGGGGGAGAGTGACGGCGAAGATGGGGCAGTGTCCACATCAGAGGATGCAATTTATGGGGAGAAAGTGGAGCCTGCTTTTGACTTGATGAAGACAATGTTGCGAGCTTCGTATACAGAAACGAAGGATTTGAAACCTATTGTGGAGGAGAAAAACCTTGAATTGGAGGTGACCAATAATAGGAAGGCAACTAAGGTTGATGCTGTGAATGGGGGTGGTACTGAGGTGAAGTCGGGCTTGGAATTGAAGAGGCAATTAAAGGGTTCAGCTTCAAATGGTATTGGTGATGTTGAGGTGAAAGGGAAGGATGGACCCAAGTTTAAAGATTTGGGTGGGATGAAGGAGGTGTTGGAGGAATTGAAAATGGAGGTGATTGTGCCACTTTACCATCCTCAGTTGCCAAGAAGGTTAGGGGTGAGGCCAATGGCAGGGATTTTGTTGCATGGACCTCCCGGCTGTGGGAAAACTAAACTGGCTCATGCTATAGCTAATGAGACTGGTCTTCCATTCTATCAGATATCCGCTACAGAGGTGGTGTCCGGAGTTTCTGGAGCATCTGAAGAAAATATTAGAGAGCTTTTCTCGAAAGCTTACAGGACTGCCCCatcaattgtctttattgatgagaTTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATTGTGACACAATTAATGACTTCTATGGATCAATCGCACAGGCTTTTGCAGCCAGCTGATGGTTCAGAAAGTTCCGATTCCCATCCTGGGTATGTTCTTGTAATTGGAGCTACAAACAGGCCTGATGCTGTAGACCCTGCCCTGAGAAGGCCTGGGCGGTTTGATCGTGAAATTGTCCTTGGTATTCCTGATGAATGTGCAAGGGAGGAGATCTTGTCTGTGCTTACTCACaatcttaaacttgatggctcaTTTGATCTTCGAAAAATAGCCAGGTCCACGCCAGGTTTTGTGGGAGCTGATTTGGCAGCTCTAGCTAACAAGGCAGGTAACCTAGCAATGAAGAGAATTATTGATGAAAGGAAACGTGAATTATCCCAAGATCTTTTGGACGAGAATAATGAAGAGTGGTGGAGGGAACCTTGGTTGCCTGAAGAGATGGATAAGCTTGCCATCAAAATGTCTGATTTTGAGGAAGCGGTTAAATTGGTGCAACCTTCATCAAGAAGAGAAGGATTCTCTTCCATTCCTAATGTAAAATGGGAAGATGTTGGTGGGCTTGATCTTCTAAGACAAGAGTTTGAGCGTTATATAGTTAAACGTATAAAATATCCAGAGGATTATGAGGGATTTGGGGTGGACCTTGAGACAGGATTTTTGCTTTATGGACCACCAGggtgtggtaaaacattgattGCTAAAGCTGTTGCCAATGAGGCAGGAGctaattttattcatatcaagGGTCCTGAACTTTTAAATAAATACGTTGGAGAAAGTGAGCTAGCAGTTCGGACATTGTTTAGTCGTGCAAGGGCATGTGCACCTTGCATACTTTTCTTTGATGAGGTGGATGCTTTGACAACCAAACGTGGTAAAGAAGGTGGATGGGTTGTTGAACGACTATTGAACCAGTTGCTTATTGAATTAGATGGAGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGTGCTACAAACAGGCCTGAGGTGATGGACCGTGCTGTCCTTCGACCCGGTAGGTTTGGTAAACTTCTTTATGTTCCTCTACCAAACCCAGATGAGCGAGGTTTGATCTTAAAAGCTCTTGCAAAGAAGAAGCCTGTTGATGACAGTGTGGATTTGAGTGCCATTGGAAGAATGGAAGCTTGTGAAAACCTCAGTGGCGCAGATCTCTCTGCATTGATGAACGAAGCAGCAATGGCAGCGCTTGAAGAGAAATTGGCATTAACCGtgaaaacttctgaaacattgaCCATCAAGGATAGCCATTTTGAGATAGCACTACATAAAATCTCTCCGTCGGTGTCGGACACGGATATAAACTTGGGCAGCCTAGGGTTTTCTGCGGTTCAATTTTTTACCATATTCTTTGAATTTGTTGTTCAAAAGGGCCAATTTTGGGAGTATTAA 2496 0.4231 MGRRNGGRSLQEILRRRLETCKSRYSTIDEIVNHLRSNYPDYQRTKHQTLSRFVQQALESSKQLNRKPSTPVLKHDTSEDDEEGRSASRKRPKKLDDSEERLQKMENLHLRRLQRDQSNTATSSASTSSPSSSEVSGESDGEDGAVSTSEDAIYGEKVEPAFDLMKTMLRASYTETKDLKPIVEEKNLELEVTNNRKATKVDAVNGGGTEVKSGLELKRQLKGSASNGIGDVEVKGKDGPKFKDLGGMKEVLEELKMEVIVPLYHPQLPRRLGVRPMAGILLHGPPGCGKTKLAHAIANETGLPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTSMDQSHRLLQPADGSESSDSHPGYVLVIGATNRPDAVDPALRRPGRFDREIVLGIPDECAREEILSVLTHNLKLDGSFDLRKIARSTPGFVGADLAALANKAGNLAMKRIIDERKRELSQDLLDENNEEWWREPWLPEEMDKLAIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDVGGLDLLRQEFERYIVKRIKYPEDYEGFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARACAPCILFFDEVDALTTKRGKEGGWVVERLLNQLLIELDGAEQRQGVFVIGATNRPEVMDRAVLRPGRFGKLLYVPLPNPDERGLILKALAKKKPVDDSVDLSAIGRMEACENLSGADLSALMNEAAMAALEEKLALTVKTSETLTIKDSHFEIALHKISPSVSDTDINLGSLGFSAVQFFTIFFEFVVQKGQFWEY 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2178 831 CDD AAA 580 711 - -
Sto7g2178 831 Gene3D - 539 802 IPR027417 -
Sto7g2178 831 PANTHER NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE 18 803 - -
Sto7g2178 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 539 803 IPR027417 -
Sto7g2178 831 ProSitePatterns AAA-protein family signature. 681 699 IPR003960 GO:0005524|GO:0016887
Sto7g2178 831 Gene3D - 233 423 IPR027417 -
Sto7g2178 831 CDD AAA 275 423 - -
Sto7g2178 831 Pfam ATPase family associated with various cellular activities (AAA) 280 422 IPR003959 GO:0005524|GO:0016887
Sto7g2178 831 Pfam ATPase family associated with various cellular activities (AAA) 582 710 IPR003959 GO:0005524|GO:0016887
Sto7g2178 831 Gene3D - 712 791 - -
Sto7g2178 831 MobiDBLite consensus disorder prediction 72 113 - -
Sto7g2178 831 MobiDBLite consensus disorder prediction 56 152 - -
Sto7g2178 831 SMART AAA_5 577 713 IPR003593 -
Sto7g2178 831 SMART AAA_5 276 426 IPR003593 -
Sto7g2178 831 MobiDBLite consensus disorder prediction 56 71 - -
Sto7g2178 831 PANTHER AAA-FAMILY ATPASE 18 803 - -
Sto7g2178 831 ProSitePatterns AAA-protein family signature. 394 412 IPR003960 GO:0005524|GO:0016887
Sto7g2178 831 Gene3D - 425 533 - -
Sto7g2178 831 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 530 IPR027417 -
Sto7g2178 831 MobiDBLite consensus disorder prediction 114 138 - -
Sto7g2178 831 Pfam AAA+ lid domain 447 482 IPR041569 -
Sto7g2178 831 Pfam AAA+ lid domain 733 787 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2178 Sto-Chr7 27367942 27373258 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2178 239 796 Calmodulin-binding Proteins AT3G56690 36.911 2.57e-118 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2178 K14571 - gmx:100809594 1155.97