Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2096 atgaTCATAATGGGGAAggacaccaccaccaccaccaccaccaccaaggGAACGAAGCAAAACAACATTAACAATGGGAATTCGATGAAGCTAAGGAAGGGACTATGGTCGCCCGAGGAAGACGAGAAGCTCATAAGGTACATGCTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCAGGGCTTCAGAGATGTGGCAAAAGCTGTCGTCTCCGTTGGATCAATTACCTCAGACCCGACCTCAAGCGTGGAGCCTTCTCTCTCCAGGAAGAACATCTCATTCTCCACTTGCATTCCATTCTTGGCAATAGATGGTCTCAAATAGCAGCACGTCTTCCCGGACGCACAGACAATGAAATTAAGAATTTCTGGAACTCTACCTTGAAGAAGAGGATGAAAAACAACCCTACTTCTTCTACTTCCACTACTACTCCTTCACCAAACACCAGTACAGATGATTCCTCATCAGATCATCATCATGTTCTGATGAATggcatcaccaccaccaccaccaccaccaccatgccCTTCAATAGCAAACAAGAAGACCTCATCAACATCACAATGTGCATGGACTCATCATCCTCCTCCTcaatgtcatcatcatcatccattcAATCCATGCAATTGGCAACCATGGCTTTTCCAATGGAATACCCCTTTTCCAATATGTTGAGTCATAGTAATAATCCATATCATCATCATGACATGGGGTTTTATGGTGATGACTATGGTGGGATGGTgttagaagaagaaagagatcaACTCTGTCTTCCTCCATTAGAGAGTCAGAGTAATGCTCCTATTGAtgttgttgatgatgatgatgtgaaaACCCATAACATCAGCTTCAGTAATAATGGTTGCTTCAATCACACTGCTAATCATCATCAGATCAGCTCATCAAAAGTGGATTTGTTTGGGTTTGGATCAAATCATCATCATGATGATCATGTTCAATATGGGCAATCAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTGATGCAAGATATAtcctcttttcctttccttgaTTTCCAAGTTGAATAA 1071 0.3585 MIIMGKDTTTTTTTTKGTKQNNINNGNSMKLRKGLWSPEEDEKLIRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEHLILHLHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNPTSSTSTTTPSPNTSTDDSSSDHHHVLMNGITTTTTTTTMPFNSKQEDLINITMCMDSSSSSSMSSSSSIQSMQLATMAFPMEYPFSNMLSHSNNPYHHHDMGFYGDDYGGMVLEEERDQLCLPPLESQSNAPIDVVDDDDVKTHNISFSNNGCFNHTANHHQISSSKVDLFGFGSNHHHDDHVQYGQSGENLRMGEWDLEGLMQDISSFPFLDFQVE 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2096 356 MobiDBLite consensus disorder prediction 129 163 - -
Sto7g2096 356 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Sto7g2096 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
Sto7g2096 356 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Sto7g2096 356 CDD SANT 88 131 IPR001005 -
Sto7g2096 356 PANTHER MYB DOMAIN PROTEIN 55 21 356 - -
Sto7g2096 356 Gene3D - 30 86 - -
Sto7g2096 356 SMART sant 32 82 IPR001005 -
Sto7g2096 356 SMART sant 85 133 IPR001005 -
Sto7g2096 356 CDD SANT 36 80 IPR001005 -
Sto7g2096 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 80 IPR017930 -
Sto7g2096 356 Gene3D - 87 162 - -
Sto7g2096 356 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Sto7g2096 356 MobiDBLite consensus disorder prediction 129 155 - -
Sto7g2096 356 Pfam Myb-like DNA-binding domain 36 95 - -
Sto7g2096 356 PANTHER TRANSCRIPTION FACTOR MYB83 21 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2096 Sto-Chr7 26565099 26568480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2096 3 356 MYB Transcription Factor Family AT3G08500 44.444 7.36e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sto7g2096 Myb_DNA-bind_6 3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2096 K09422 - zju:107417581 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2096 7 26565099 26568480 Sto7g2096 7 26565099 26568480 ECH