Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2084 ATGTCTGTTATTGCCCACGTTGATCATGGAAAATCAACTCTCACGGATTCTCTAGTGGCTGCTGCTGGTATTATTGCCCAAGAAGTGGCAGGTGATGTCAGGATGACTGATACCCGTGCAGATGAAGCTGAGCGTGGTATCACAATCAAGTCTACTGGTATATCTCTCTACTATGAGATGACTGATGAGTCCCTCAAGAGCTACAAGGGAGAGCGGCAAGGTAATGAATACCTCATCAATCTGATTGACTCCCCCGGGCACGTGGACTTCTCATCTGAGGTCACAGCTGCACTTCGCATCACTGATGGAGCGTTGGTGGTGGTGGATTGCGTTGAGGGTGTGTGTGTCCAGACAGAAACTGTGCTGCGACAAGCCTTGGGAGAAAGGATTAGGCCTGTTTTGACTGTTAATAAGATGGACAGGTGCTTCCTTGAGCTCCAGGTGGATGGAGAGGAGGCTTACCAAACATTTCAGAGAGTTATTGAGAATGCTAATGTGATCATGGCTACATATGAAGATCCTCTCCTTGGTGATGTCCAGGTTTACCCAGAGAAAGGAACAGTTGCTTTTTCTGCTGGTTTGCATGGGTGGGCATTCACTCTTACCAACTTCGCAAAAATGTATGCCTCAAAATTTGGAGTTGATGAATCAAAGATGATGGAAAGGCTTTGGGGTGAGAACTTCTTTGATCCAGCCACAAAGAAATGGACAACAAAAAATACTGGTTCTCCTACTTGCAAGCGTGGCTTTGTTCAGTTCTGTTATGAGCCAATCAAGCAGATAATCAACACTTGTATGAATGATCAGAAGGATAAGCTGTGGCCCATGTTGCAAAAGCTTGGAGTCACCATGAAATCAGATGAGAAGGATCTGATGGGTAAAGCATTGATGAAACGTGTGATGCAAACCTGGCTTCCAGCAAGTACCGCACTGTTGGAAATGATGATATTTCATCTTCCCTCACCAGCAACAGCCCAGAAGTATCGTGTTGAGAACTTGTACGAGGGTCCTCTTGATGATGCTTACGCTACTGCTATCAGAAACTGTGATCCTGAGGGTCCTCTGATGCTTTATGTCTCCAAGATGATTCCCGCATCTGACAAGGGTAGGTTTTTTGCTTTTGGCCGTGTCTTCTCTGGTAAGGTCTCTACTGGTTTGAAAGTGAGAATTATGGGACCAAACTATGTCCCCGGGGAGAAGAAAGATTTATACGTTAAGAGCGTGCAAAGAACTGTGATTTGGATGGGAAAGAAGCAAGAAACTGTTGAGGATGTTCCTTGTGGAAACACCGTGGCTATGGTTGGTCTGGATCAATTTATTACCAAGAATGCCACTTTAACAAATGAGAAGGAAGTCGATGCCCACCCTATCAAGGCTATGAAGTTTTCTGTCTCTCCTGTGGTTCGTGTTGCTGTTCAGTGCAAGGTTGCCTCTGATCTTCCCAAGCTTGTTGAAGGTCTTAAGCGTTTGGCAAAGTCAGATCCTATGGTTGTTTGTACCATTGAGGAGTCAGGGGAGCACATTGTTGCTGGGGCAGGAGAACTTCACCTTGAGATTTGTTTGAAGGACTTGCAAGAAGATTTCATGGGTGGAGCTGAGATTATTAAGTCTGACCCTGTTGTGTCATTCCGTGAGACTGTCCTTGAGAGATCTTGCCGTACTGTGATGAGCAAGTCACCCAACAAGCACAACCGTCTGTACATGGAAGCCAGACCTATGGAGGATGGGCTTGCCGAGGCAATTGATGACGGCAAGATTGGACCAAGGGATGATCCCAAAGTGCGTTCTAAAATTCTGTCTGAAGAGTATGGTTGGGACAAGGATCTTGCCAAGAAAATCTGGTGTTTTGGACCTGAGACCCTTGGACCAAACATGGTGGTGGATATGTGTAAGGGAGTGCAGTACTTGAATGAAATCAAGGACTCAGTTGTTGCTGGGTTCCAGTGGGCATCAAAGGAAGGTGCATTGGCTGAAGAGAACATGAGGGCCATATGCTTTGAAGTCTGTGATGTCATCATTCCTACTGCCAGGAGAGTCTTCTATGCTTCGCAGTTGACTGCCAAGCCCAGGCTTCTCGAGCCAGTTTACCTGGTGGAAATCCAAGCTCCTGAGCAGGCTCTTGGTGGAATCTACAGTGTTCTTAACCAGAAACGTGGGCATGTCTTTGAGGAGATGCAGAGGCCCGGTACACCGCTGTACAACATTAAGGCATACCTTCCTGTCATTGAATCTTTTGGATTCTCTAGCACATTGAGGGCTGCAACATCAGGACAGGCCTTCCCCCAATGTGTGTTTGATCACTGGGATATGATGTCATCAGACCCAATGGAGGCTGGATCTCAAGCTGCACAGCTTGTTTGTGACATTCGCAAGAGGAAGGGCTTGAAGGAGCAGATGACTCCACTTTCAGAATTTGAGGACAAGCTTTAA 2430 0.465 MSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDESLKSYKGERQGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVVDCVEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFQRVIENANVIMATYEDPLLGDVQVYPEKGTVAFSAGLHGWAFTLTNFAKMYASKFGVDESKMMERLWGENFFDPATKKWTTKNTGSPTCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSDEKDLMGKALMKRVMQTWLPASTALLEMMIFHLPSPATAQKYRVENLYEGPLDDAYATAIRNCDPEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIKAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQEDFMGGAEIIKSDPVVSFRETVLERSCRTVMSKSPNKHNRLYMEARPMEDGLAEAIDDGKIGPRDDPKVRSKILSEEYGWDKDLAKKIWCFGPETLGPNMVVDMCKGVQYLNEIKDSVVAGFQWASKEGALAEENMRAICFEVCDVIIPTARRVFYASQLTAKPRLLEPVYLVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSSTLRAATSGQAFPQCVFDHWDMMSSDPMEAGSQAAQLVCDIRKRKGLKEQMTPLSEFEDKL 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2084 809 Pfam Elongation factor Tu domain 2 373 446 IPR004161 GO:0005525
Sto7g2084 809 CDD aeEF2_snRNP_like_IV 538 697 - -
Sto7g2084 809 Gene3D - 1 202 IPR027417 -
Sto7g2084 809 Pfam Elongation Factor G, domain III 466 528 IPR041095 -
Sto7g2084 809 SUPERFAMILY EF-G C-terminal domain-like 463 539 IPR035647 -
Sto7g2084 809 Pfam Elongation factor G, domain IV 589 671 IPR005517 GO:0005525
Sto7g2084 809 SUPERFAMILY Translation proteins 321 455 IPR009000 -
Sto7g2084 809 Gene3D Yeast translation eEF2 (G' domain) 203 305 - -
Sto7g2084 809 SUPERFAMILY EF-G C-terminal domain-like 693 804 IPR035647 -
Sto7g2084 809 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 323 IPR000795 GO:0003924|GO:0005525
Sto7g2084 809 Gene3D - 549 688 IPR014721 -
Sto7g2084 809 Gene3D Elongation Factor G (Translational Gtpase), domain 3 465 542 - -
Sto7g2084 809 Gene3D Translation factors 322 463 - -
Sto7g2084 809 SMART EFG_C_a 690 779 IPR000640 -
Sto7g2084 809 SMART EFG_IV_2 584 688 IPR005517 GO:0005525
Sto7g2084 809 SUPERFAMILY Ribosomal protein S5 domain 2-like 541 692 IPR020568 -
Sto7g2084 809 Pfam Elongation factor G C-terminus 690 777 IPR000640 -
Sto7g2084 809 Pfam Elongation factor Tu GTP binding domain 1 321 IPR000795 GO:0003924|GO:0005525
Sto7g2084 809 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 37 52 IPR031157 -
Sto7g2084 809 CDD EF2_snRNP_III 466 538 - -
Sto7g2084 809 PRINTS GTP-binding elongation factor signature 44 52 IPR000795 GO:0003924|GO:0005525
Sto7g2084 809 PRINTS GTP-binding elongation factor signature 80 90 IPR000795 GO:0003924|GO:0005525
Sto7g2084 809 PRINTS GTP-binding elongation factor signature 96 107 IPR000795 GO:0003924|GO:0005525
Sto7g2084 809 PRINTS GTP-binding elongation factor signature 132 141 IPR000795 GO:0003924|GO:0005525
Sto7g2084 809 Gene3D - 689 809 - -
Sto7g2084 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 320 IPR027417 -
Sto7g2084 809 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 808 - -
Sto7g2084 809 CDD eEF2_snRNP_like_C 693 771 - -
Sto7g2084 809 PANTHER - 1 808 - -
Sto7g2084 809 TIGRFAM small_GTP: small GTP-binding protein domain 3 155 IPR005225 GO:0005525
Sto7g2084 809 CDD EF2 1 209 - -
Sto7g2084 809 CDD EF2_II 354 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2084 Sto-Chr7 26450626 26453388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2084 1 809 Eukaryotic Initiation Factors Gene Family AT1G56070 91.606 0.0 1577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2084 K03234 - gmx:100804251 1578.15