Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2061 ATGGACAAAGGAGTGCCTCCTAGCCTTTTTGTTAATGATGGTTCGTTCATGGAGAGGTTCAAGCAACTTCAAGAAGAGCAGGAAAAGAAGAATGCAAACATAGAGGATTCTAAACCAATTAAAATTGTTTCAGGGTCTTTGACTCCTAATCTTTCCTTTAGTAAAAAAACCTCTACAGACTTTAAGGCTAATGATTCACGGAAAACATCCCAGGCTGGTTCAAGTGGCAAACTCGCGTTCAGTTTAAAACAAAAGTCAAGGCTAGTGCCACCACCTGTTAAGTTAGCTgcggatgatgatgaagaagaagaaacaaatggTATCAATGTTTCAAGTGATGCACCTTCAAAACGACAAAAGTTGGGGCAGGAAGATGGCATTGAGCAATCTGATGGTGGTAATTACTTCTCAAAACTTCTTTTGTTGTCTAGTTGTCTTGTAGTTGACAGTCTTACTCAATGCAGTTCTGCCAAGGAATTGGGGGAGAGAAAGAAGGATGTGAACTTGGGTGTGTTTGTGAAGTATGTTCAGAACTTGCCTTTGAGTTACTTAGGTGAAGGCGCTTTAGAATGTCTTCTTCCCTTCCCAGCCTGTTTAGGCATACAGTTAGGTGATCTCGGTATATACCTTCTTCACACATTGAAATTGTGCAGCAAAGAGGATAAAAGTCTTGAATGTTTTTGTCTCATGAATGCAGCTTATTCCTCAAGAGAATGGTCTATTGCACCTTCTTCCCCAAGTGATCCTACAGTGAAGAAAGTTGCTGAGAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACCCGTCAAAAAAATCCAGGGGATACACCTTTTAAATTTTTATTTGATGTGAAATGCTCTGACTACAAATATTATGAATATCTGCTAGCTCAAGAGGAAAAGGCTCTGGCACAGCCTAGGGAATCAGAGACATCTCGTAATGGGGGTACAAGCACTTCATCTTCCAGAATAACAAATGTTCCTCAGAGATCATCTCAGCAGCATTCAACTTACCAAATTCCTGCATCTGCTTTATATGAAAGTTCTGAAGATCCAAGAGGTTATGGATCTTCAGGTCAAGCAGGATCAAGAGGAAGTACTGACGACACTGGTGGATCATCAAATGCCAATTCTCTAGCACTAATGGAATTCTACATGAAGAAAGCTGCGCAGGAAGAGAAGAGGAAACAACCTAGGCAATCAAAAGATGAGATGCCCCCTCCTGCTTCTCTTCAAGCAACGCCTTCAAAAAAAGGTCATCACATGGGTGATTACATTCCCCTTGAGGAACTTGAGAAGTTCATGGCTAACTGCAATGATGCAGCAGCACAAAAAGCTGCCAAGGAAGCAGCAGAGAGAGCTAAAATTCAGGCTGATAATGTGGGCCACAGGCTCTTGTCAAAAATGGGATGGAAAGAAGGTGAGGGACTGGGCAGCTCCGGGAACGGCATTTCTGATCCGATCATGGCAGGTAATGTTAAGATGAACAACTTGGGGGTTGGTGCTAACAATCCAGGGGAGGTTACACCTGATGATGACATATATGAGCAGTACAAAAAACGGATGATGCTTGGTTATCGCTACAGACCCAACCCAATGGTATACTGTGTTTTGGTTTTCTGA 1638 0.4127 MDKGVPPSLFVNDGSFMERFKQLQEEQEKKNANIEDSKPIKIVSGSLTPNLSFSKKTSTDFKANDSRKTSQAGSSGKLAFSLKQKSRLVPPPVKLAADDDEEEETNGINVSSDAPSKRQKLGQEDGIEQSDGGNYFSKLLLLSSCLVVDSLTQCSSAKELGERKKDVNLGVFVKYVQNLPLSYLGEGALECLLPFPACLGIQLGDLGIYLLHTLKLCSKEDKSLECFCLMNAAYSSREWSIAPSSPSDPTVKKVAEKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDVKCSDYKYYEYLLAQEEKALAQPRESETSRNGGTSTSSSRITNVPQRSSQQHSTYQIPASALYESSEDPRGYGSSGQAGSRGSTDDTGGSSNANSLALMEFYMKKAAQEEKRKQPRQSKDEMPPPASLQATPSKKGHHMGDYIPLEELEKFMANCNDAAAQKAAKEAAERAKIQADNVGHRLLSKMGWKEGEGLGSSGNGISDPIMAGNVKMNNLGVGANNPGEVTPDDDIYEQYKKRMMLGYRYRPNPMVYCVLVF 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2061 545 SMART G-patch_5 461 508 IPR000467 GO:0003676
Sto7g2061 545 PANTHER SURP AND G PATCH DOMAIN-CONTAINING 1 3 538 - -
Sto7g2061 545 Coils Coil 17 37 - -
Sto7g2061 545 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 3 538 IPR040169 -
Sto7g2061 545 ProSiteProfiles G-patch domain profile. 463 510 IPR000467 GO:0003676
Sto7g2061 545 MobiDBLite consensus disorder prediction 23 81 - -
Sto7g2061 545 MobiDBLite consensus disorder prediction 43 81 - -
Sto7g2061 545 SUPERFAMILY Surp module (SWAP domain) 241 305 IPR035967 GO:0003723|GO:0006396
Sto7g2061 545 Pfam Surp module 254 303 IPR000061 GO:0003723|GO:0006396
Sto7g2061 545 MobiDBLite consensus disorder prediction 308 381 - -
Sto7g2061 545 Pfam G-patch domain 464 507 IPR000467 GO:0003676
Sto7g2061 545 ProSiteProfiles SURP motif repeat profile. 254 297 IPR000061 GO:0003723|GO:0006396
Sto7g2061 545 Gene3D Surp module 238 308 IPR035967 GO:0003723|GO:0006396
Sto7g2061 545 MobiDBLite consensus disorder prediction 95 129 - -
Sto7g2061 545 MobiDBLite consensus disorder prediction 358 381 - -
Sto7g2061 545 MobiDBLite consensus disorder prediction 313 349 - -
Sto7g2061 545 SMART surpneu2 252 306 IPR000061 GO:0003723|GO:0006396
Sto7g2061 545 MobiDBLite consensus disorder prediction 395 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2061 Sto-Chr7 26236511 26240556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2061 459 506 C2H2 Transcription Factor Family AT5G26610 52.083 5.89e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2061 K13096 - nnu:104597485 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2061 7 26236511 26240556 Sto7g2061 7 26236511 26240556 ECH