Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g2056 ATGGCGCCGAGGAAGACTCCGAGGGTGAGCCGAAACCCTGAATTGATAAGGGGTATTGGGAAGTACTCGAGGTCCCAAATGTATCACAAGAGGGGTCTCTGGGCAATCAAGGCCAAAAACGGCGGCGTTTTCCCTCGTCACGATCCCAAGCCAAAGCCCGAGGTTGCCGCTCAGAAACCCCCCAAATTCTACCCCGCCGATGATGTCAAGAGGCCTCTTGTTAATAAGCACAAGCCCAAACCTACTAAGCTCAGGGCTAGCATTACTCCTGGCACTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGGAAGAGAGTAGTTTTTCTGAAGCAGCTTCCTTCTGGGTTGCTTCTTGTCTCTGACTATTTGGTGTCATGTGCTCTACACTGGTCTATCTTTTCATGTCTTGTCCTTTTTGTTTCAGGtccatttaaaattaatggtgTTCCTTTGAGACGCGTTTGCCAATCTTATGTCATTGGCACTTCCACGAAGGTCGATGTTTCTGGAGTTAATGTTGATAAATTTGACGACAAATACTTCGCCAAGCCagcggagaagaagaagaagaaaactgaAGGGGAGTTTTTTGAAGCCGAAAAAGAGGAGAAAAGTGTGATCCCCCAGGAGAAGAAAGATGACCAAAAAACTGTGGATTCTGCATTGATAAAAGCCATTGAGAGTGTTCCAGAGTTGAAGGCTTATTTGGGTGCAAGGTTTTCTCTGCAATCTGGCATGAAGCCTCACGAGCTAGTGTTTTAA 762 0.4436 MAPRKTPRVSRNPELIRGIGKYSRSQMYHKRGLWAIKAKNGGVFPRHDPKPKPEVAAQKPPKFYPADDVKRPLVNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVSDYLVSCALHWSIFSCLVLFVSGPFKINGVPLRRVCQSYVIGTSTKVDVSGVNVDKFDDKYFAKPAEKKKKKTEGEFFEAEKEEKSVIPQEKKDDQKTVDSALIKAIESVPELKAYLGARFSLQSGMKPHELVF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g2056 253 MobiDBLite consensus disorder prediction 45 69 - -
Sto7g2056 253 PANTHER 60S RIBOSOMAL PROTEIN L6 1 120 - -
Sto7g2056 253 PANTHER 60S RIBOSOMAL PROTEIN L6 137 253 - -
Sto7g2056 253 Pfam Ribosomal protein L6e 146 253 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sto7g2056 253 Pfam Ribosomal protein L6, N-terminal domain 5 60 IPR005568 GO:0003735|GO:0005840|GO:0006412
Sto7g2056 253 CDD KOW_RPL6 80 253 IPR041997 -
Sto7g2056 253 PANTHER 60S RIBOSOMAL PROTEIN L6 1 120 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sto7g2056 253 PANTHER 60S RIBOSOMAL PROTEIN L6 137 253 IPR000915 GO:0003735|GO:0005840|GO:0006412
Sto7g2056 253 SUPERFAMILY Translation proteins SH3-like domain 86 197 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g2056 Sto-Chr7 26174150 26175946 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g2056 2 253 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 75.397 4.99e-119 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g2056 K02934 - gmx:100784101 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g2056 7 26174150 26175946 Sto7g2056 7 26174150 26175946 ECH