Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1993 ATGATAAATGAAAATGGAAGCCAGTCCATTTTGGTAAGTGGAGAGAGTGGAGCTGGTAAAACAGAGACAACAAAAATGCTAATGAGATATCTAGCTTTCATGGGGGGAAGATCAAATACAGAAGGAAGAACAGTAGAACAACAGGTTTTGGAGTCCAATCCAGTGTTGGAAGCATTTGGGAATGCCAAAactgtaaaaaataataattcaagTCGTTTTGGTAAATTTGTTGAAATTCAATTTGACAAGAATTGGAAGATTTCTGGAGCCGCAATCCGTACATATCTCCTCGAAAGGTCACGAGTTTGCCAGGCTTCAGATCCAGAGAGAAACTATCATTGCTTTTACATGCTTTGTTCAGCACCACCAGAGGATGTCAAAAAGTTCAAGTTAGGGGACCCAAGGCAATTTCACTATCTTAATCAATCAAACTGCTACGAAGTAGCAAATGTGGATGATGCAAAAGAATACCTGGAGACCAGAAATGCTATGGATATTGTAGGCATCAGCCAGGATGAGCAGGATGCTATTTTCCGTGTGGTAGCTGCAATCCTCCATCTTGGAAACATTGACTTCATCAAAGGGAAGGAAGTTGATTCTTCCAAGTTGAAAGATGAGAAATCAGTCTTCCACCTTCAAACTGCTGCTGAGCTACTTATGTGTGATGAGAAAGCACTAGAAGACTCACTTTGCAAGCGCGTCATAGTTACTCCCGACGGTAACATCACAAAACCACTAGACCCAGATTCGGCTGCTTTGAGCAGAGATGCTTTGGCAAAGACTGTGTACTCCAGGCTGTTTGATTGGATTGTGGACAAGATAAACTGTTCAATTGGTCAAGATCCCAATGCTGCAAGCTTAATAGGAGTCCTTGACATTTATGGGTTTGAAAGTTTCAAAATCAACAGTTTTGAGCAACTTTGTATCAACCTAACAAATGAGAAGTTGCAACAACATTTTAACCAGCACGTGTTTAAGATGGAGCAAGAAGAGTACACAAAGGAAGAAATCAACTGGAGCTATGTCGAATTCGTGGATAATCAAGATGTTCTGGATCTTATTGAAAAGAAACCGGGAGGAATAATTGCTCTTCTTGATGAAGCCTGCATGTTCCCCAAGTCAACCCATGAGACATTTGCACAAAAACTGTATCAGACATACAAAGCACACAAGCGCTTCAGCAAGCCAAAGCTTGCTCGAACAGATTTCACAATTAACCATTACGCTGGAGATGTCACATACCAAGCAGATCAGTTTcttgataaaaataaagattatgTTGTAGCGGAGCATCAAGCTCTTTTAAATGCCTCCAAGTGCACATTTGTTGCTAATCTTTTCCCTCCATTACCTGAGGAGACATCAAAGCAATCAAAATTCTCATCCATTGGTTCGCGATTCAAGCAACAACTACAATCTCTGATGGAGACATTAAACACAACAGAACCACATTACATCAGATGTGTGAAACCAAATACAGTTTTGCAGCCTGGAATATTTGAGAACTTCAATGTCTTAAACCAGTTGAGATGTGGAGGAGTACTTGAGGCAATTAGGATTAGCTGTGCTGGATATCCAACAAAAAGAACATTCGACGAGTTTCTTGATCGTTTCGGAATGCTAGCCCCTGATGTCCTAGACGGATCTGAGGAGAAAACAGCATGTGTTGCCATATGTGATAAGATGGGATTAAAAGGCTATCAAATGGGGAAAACAAAGGTGTTTCTCAGAGCTGGTCAGATGGCTGAATTAGATGCACGAAGAGCTGAAGTCTTAGCTAAAGCTGCTAGATGCATACAGAGACAAATCAGAACACACTTGACCAGAAAAGAGTTCATTACTCTGAGAAAGGCCAcaatttatatacaaaaaatatgGAGAGCCAAACTTGCACGTAAGCTCTATGAGAATATGCGGAGGGAAGCAGCTTCTATCCGCATACAGAAACATGCACGTGCACACACTGCAAGAATGCATTATACATCATTGCAAGCATCAGCAATAGTTATTCAGTCAGGGTTAAGAGCAATGGCAGCAAGAAATGAATACAGATACAGACGAAGAACGAAAGCTGCAGCCAAAATTCAGACACAATGGAGGAGAGCCCAAGCGTTTTCTGCATACAAACAGCAGAAGAAAGCAACTATTACACTTCAATGTCTCTGGAGAGCTAAAGTAGCTAGGAAGGAGCTCAGAAAGCTACGAATGGCTGCAAGGGAAACTGGGGCACTTAAGGAGGCAAAGGACAAGTTGGAGAAGCGTGTTGAAGAGCTTACATGGAGACTAGACTTTGAAAAGCACTTGAGGATTGACCTTGAAGAAGCTAAAGGGCAAGAAATTGCAAAGTTACAGAATACTTTACATGAAATGCAAGGTCAGCTAGAAGAAGCCCATGCTGCAATTATACATGAGAAAGAAGCGGCAAAACTAGCAATTGAATCAGCACCACCGATCATTAAAGAAGTACCTGTTGTGGACAACACCAAGCTAGAGCTACTGACAAATAAAAATGTGGAGCTAGAGAGTGAGGTAGAAGAGCTGAAAAAGAAGATTGAAGAATTCGAGGAGAAGTATTCAGACATACAAAAGGAGAATCAAGCAACGCTGAAAGAGGCAGAAGAAGCCCAGCTGAAAGCAACACAACTTCAGGAGACAATTGAAAGATTAGAAGTGAATTTGTCCAACCTTGAGTCTGAGAATCAAGTTCTACGTCAGCAGGCTTTGGTCGAATCAAAAAATGAGGAACTCTCTGAAGAGCTTAAAACCCTCAAAAATCAGATAGCAAATTTAGAATCAGAGAATGAAATTCTCCGGAACCaggcagcagcagcagcagctacTGTCCAGCAGAAAGTTCATCCAGAAAAAATAGAAACAGAAGATCAGGAAGCTGTTGTTGTGGAGAAAATACAACACAAAGTTGACCCAGATACAATAAATTTACAAGTCAAGAATTTGGATAATGGAAACCTGACAGCAGAAGAATACCAAGCAAGAAAAGAACCGAGACAACCCATCTCCTTCCTTACAAAACAAAGATCACTTACAGACAGGCAGCAGGAAAGCCATGATGCACTACTCAAGTGTCTTGCAGAAGATAAGAGATTTGAGAAAAACAGACCGGTTGCTGCTTGTGTTATCTATAAAGCACTTCTTCAATGGAGATCCTTTGAAGCAGAGAAGACacatatatttgataaaattattcaCACAATTCGATCATCTGTAGAGAGTCAAGAAGGAATAAATGACTTAGCATATTGGCTCTCAACAACTTCAACATTACTGTTTTTTCTACAAAGCACACTCAAAGCCAGCAACACAACAAAGGCAGTATCTCGTAATCGAAATTCCCCTGCCACTTTATTTGGCAGGATGGCACAAggTTTGCTTTCATCCTCTATGGGCATGGGGGTTTCAAGTGGCTACAGTGGAATGGTGGGAAAGCCAAATGAGCAATCTAAAGTGGAAGCCAAGTATCCAGCTATTCTATTTAAGCAGCATTTAACTGCATATGTTGAGAAGATATATGGAATGATCCGTGACAGTTTAAAGAAAGAGATCAGTCCATTCTTAAATTTGTGCATTCAGGCACCAAGATCTATAAGGACCAGATCATTACGAGGGTCATCAAGAAATATCCACTCAAATATAGTAGCAAAACAACAAGCATCAAATATGCACTGGAAAAGCATTGTCGATAAGTTAGACCATACATTGGGTATATTATCAGACAACTATGTCCCTTCCATGATTACAAGGAAGATTTTTAGTCAGGTGTTCTCTTTCATGAATGTACAGCTTTTCAATAGTTTGTTGCTTCGTCGTGAATGCTGTTCCTTTAGCAATGGAGAATATTTAAAGGCAGGCTTGCATGAGCTGGAACAATGGTGTATCAAAGCAACTGATCAGTTTGCTGGATCTTCTTGGGATGAACTCAAGCACATACGCCAAGCTGTGGGCTTTCTGGTTTTGCATCAAAAGACACAAACATCTTTGGATGAGATTACAAGTGAACTCTGTCCGGTGTTAAGTATTCCACAAATATATCGTATTGGAACTATGTTCTGGGACGACAAGTATGGAGCACAGGGGTTATCTCCAGAAGTAATTAGCAGAATGAGGGTGCTTATGGCAGAAGACTCCATAAACATACCCAATAACTCCTTCCTTCTTGAGGTGGATTCAAGCATACCTTTCTCAATGGAGGAGATGTTCCGTTCTATGAGTGACATTCGCCTATCAGACATCGACGTGGATCCACCAACAATCCTCAGGCAAAGGTCCGACTTCCAATTCTTATTGCAACAAATGGATGGCGAGTCTCAATGA 4332 0.4005 MINENGSQSILVSGESGAGKTETTKMLMRYLAFMGGRSNTEGRTVEQQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDKNWKISGAAIRTYLLERSRVCQASDPERNYHCFYMLCSAPPEDVKKFKLGDPRQFHYLNQSNCYEVANVDDAKEYLETRNAMDIVGISQDEQDAIFRVVAAILHLGNIDFIKGKEVDSSKLKDEKSVFHLQTAAELLMCDEKALEDSLCKRVIVTPDGNITKPLDPDSAALSRDALAKTVYSRLFDWIVDKINCSIGQDPNAASLIGVLDIYGFESFKINSFEQLCINLTNEKLQQHFNQHVFKMEQEEYTKEEINWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTYKAHKRFSKPKLARTDFTINHYAGDVTYQADQFLDKNKDYVVAEHQALLNASKCTFVANLFPPLPEETSKQSKFSSIGSRFKQQLQSLMETLNTTEPHYIRCVKPNTVLQPGIFENFNVLNQLRCGGVLEAIRISCAGYPTKRTFDEFLDRFGMLAPDVLDGSEEKTACVAICDKMGLKGYQMGKTKVFLRAGQMAELDARRAEVLAKAARCIQRQIRTHLTRKEFITLRKATIYIQKIWRAKLARKLYENMRREAASIRIQKHARAHTARMHYTSLQASAIVIQSGLRAMAARNEYRYRRRTKAAAKIQTQWRRAQAFSAYKQQKKATITLQCLWRAKVARKELRKLRMAARETGALKEAKDKLEKRVEELTWRLDFEKHLRIDLEEAKGQEIAKLQNTLHEMQGQLEEAHAAIIHEKEAAKLAIESAPPIIKEVPVVDNTKLELLTNKNVELESEVEELKKKIEEFEEKYSDIQKENQATLKEAEEAQLKATQLQETIERLEVNLSNLESENQVLRQQALVESKNEELSEELKTLKNQIANLESENEILRNQAAAAAATVQQKVHPEKIETEDQEAVVVEKIQHKVDPDTINLQVKNLDNGNLTAEEYQARKEPRQPISFLTKQRSLTDRQQESHDALLKCLAEDKRFEKNRPVAACVIYKALLQWRSFEAEKTHIFDKIIHTIRSSVESQEGINDLAYWLSTTSTLLFFLQSTLKASNTTKAVSRNRNSPATLFGRMAQGLLSSSMGMGVSSGYSGMVGKPNEQSKVEAKYPAILFKQHLTAYVEKIYGMIRDSLKKEISPFLNLCIQAPRSIRTRSLRGSSRNIHSNIVAKQQASNMHWKSIVDKLDHTLGILSDNYVPSMITRKIFSQVFSFMNVQLFNSLLLRRECCSFSNGEYLKAGLHELEQWCIKATDQFAGSSWDELKHIRQAVGFLVLHQKTQTSLDEITSELCPVLSIPQIYRIGTMFWDDKYGAQGLSPEVISRMRVLMAEDSINIPNNSFLLEVDSSIPFSMEEMFRSMSDIRLSDIDVDPPTILRQRSDFQFLLQQMDGESQ 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1993 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 643 IPR027417 -
Sto7g1993 1443 PANTHER MYOSIN 910 1433 - -
Sto7g1993 1443 PANTHER MYOSIN 2 908 - -
Sto7g1993 1443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 642 740 IPR027417 -
Sto7g1993 1443 Pfam IQ calmodulin-binding motif 594 612 IPR000048 GO:0005515
Sto7g1993 1443 Pfam IQ calmodulin-binding motif 616 635 IPR000048 GO:0005515
Sto7g1993 1443 Pfam IQ calmodulin-binding motif 665 684 IPR000048 GO:0005515
Sto7g1993 1443 Pfam IQ calmodulin-binding motif 713 732 IPR000048 GO:0005515
Sto7g1993 1443 Pfam IQ calmodulin-binding motif 642 660 IPR000048 GO:0005515
Sto7g1993 1443 PRINTS Myosin heavy chain signature 7 32 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 PRINTS Myosin heavy chain signature 54 81 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 PRINTS Myosin heavy chain signature 287 315 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 PRINTS Myosin heavy chain signature 340 368 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 Gene3D - 525 587 - -
Sto7g1993 1443 Coils Coil 780 800 - -
Sto7g1993 1443 CDD MYSc_Myo11 1 577 IPR036018 -
Sto7g1993 1443 Pfam DIL domain 1256 1359 IPR002710 -
Sto7g1993 1443 SMART DIL_2 1255 1362 IPR002710 -
Sto7g1993 1443 SMART MYSc_2a 1 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 ProSiteProfiles IQ motif profile. 615 644 IPR000048 GO:0005515
Sto7g1993 1443 Coils Coil 830 947 - -
Sto7g1993 1443 Gene3D - 297 481 - -
Sto7g1993 1443 ProSiteProfiles IQ motif profile. 663 692 IPR000048 GO:0005515
Sto7g1993 1443 CDD MyosinXI_CBD 1017 1403 IPR037975 GO:0007015
Sto7g1993 1443 ProSiteProfiles IQ motif profile. 640 666 IPR000048 GO:0005515
Sto7g1993 1443 Gene3D Myosin VI head, motor domain, U50 subdomain 170 459 - -
Sto7g1993 1443 Coils Coil 734 768 - -
Sto7g1993 1443 Gene3D - 642 690 - -
Sto7g1993 1443 Gene3D - 691 739 - -
Sto7g1993 1443 Gene3D - 590 641 - -
Sto7g1993 1443 Gene3D Kinesin motor domain 1 520 IPR036961 -
Sto7g1993 1443 ProSiteProfiles Myosin motor domain profile. 1 589 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 ProSiteProfiles Dilute domain profile. 1066 1380 IPR002710 -
Sto7g1993 1443 Gene3D - 110 168 - -
Sto7g1993 1443 ProSiteProfiles IQ motif profile. 688 717 IPR000048 GO:0005515
Sto7g1993 1443 PANTHER MYOSIN-12 2 908 - -
Sto7g1993 1443 PANTHER MYOSIN-12 910 1433 - -
Sto7g1993 1443 ProSiteProfiles IQ motif profile. 711 740 IPR000048 GO:0005515
Sto7g1993 1443 SMART iq_5 662 684 IPR000048 GO:0005515
Sto7g1993 1443 SMART iq_5 614 636 IPR000048 GO:0005515
Sto7g1993 1443 SMART iq_5 710 732 IPR000048 GO:0005515
Sto7g1993 1443 SMART iq_5 639 661 IPR000048 GO:0005515
Sto7g1993 1443 SMART iq_5 687 709 IPR000048 GO:0005515
Sto7g1993 1443 SMART iq_5 591 613 IPR000048 GO:0005515
Sto7g1993 1443 Pfam Myosin head (motor domain) 1 577 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sto7g1993 1443 ProSiteProfiles IQ motif profile. 592 619 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1993 Sto-Chr7 25384422 25394542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1993 1 1438 Myosins gene family AT2G31900 74.722 0.0 2235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1993 K10357 - gmx:100817933 2439.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1993 7 25384422 25394542 Sto7g1993 7 25384422 25394542 ECH