Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1990 ATGGGTTTTGGAGTAAGGAAATTATACACCAACAAGAGTAAGAGAGATGGCTCAGTCACTTCTTGTAGATTTGTTTGTTGCAAAGAAGGCGTAAGAGCAAAAGATAAAAGAGATCGTCCCACTGTGAATCCCCGACCAGAAACCAGAACGAACTGCAAAGCTAGAATGGGACTCACATGCCTGAATGGGAAATTTAAAGTCTATGATTTAGTAGAAGAACACAATCATGTTCTTCATAGTCCAAAAACCACTCATATGCTGGCCTCTCAACGCAAGATATCGAAAGTTCAAGCACATGAGATTGAATTGGCTAATGATACCGAGTTGCAACAAAATGTGTCATATGAGTTGTTCAATAGACATGTAAGTGGAAGAGATAGTCTTGGCTACACCTGTTTAGATCAAACGAATTATCTCCAAACTAGAAGACAAAAAAGTTTGATGTTTGGGGAAGCCGGTTGTTTGCTGAGGTATTTCCAAGAACAGTTGCTAGAAGATCCGTCATTTTACCATGCTTATCAGATGGATAGTGAagaaaaaataactaatatattttgGGCTGATTCAACAATGCTCTTGGATTATGGTTATTTTGGTGATGTAGTCTCTTTGGACACAACATCTTGTATTAACCATGCACATAGACCACTTGTCATATTTTCAGGATTGAATCATTTTAAGGGAGTGGTGATTTTTGGAGCTGCATTATTATATGATGAGACAATGCCGTCATTCAAGTGGTTGTTTGAAACATTTTTGGAAGCACATTTGCAGAAAAAGCCTCAGACCATATTCACTGATCAGGATCAAGCAATAGCTAAAGCATTGCATGAGGTTATGCCAAAGGCTAAGCACGGATTATGTATTTGGCATTTGATGCAGAATGGCATCAAGCACTTGGGCAATTTGATGAAGcatgaatctcaatttttaaaaGACTTCAAGACATGTATATACGAATATGAAGATGAAACACAGTTTGAGGCTGCTTGGAGAAGATTACTGATAGATTACAATGTTCAAGAAAATACATGGCTCACATTGATATACACTTTGAAGGAGAAATGGTCAGCCTGTTATATGAACATAGTTTTCACTCTAGGAATACAAAGCACTCAACTTAGTGAAAGCTTGAATGTGGATTTCAAAAGGTGCTTGAAACCAAATATAGATATTATTGAATTCCTCAAGAACTTTGAAAGGGTTGTGGAGGATAAAAGGCATAATGAACTAAAGTGTGAATTTGAGTCACGACAAAAGCTTCCAAAATTGAAATGTGAATTCTCACCTATGCTAAAACAAGTTGCAGAAATTTACACTCCTACTATATTTGACTTGTTTCAAGATCAATTTGACATGTTCCAAGCTTGTTCTATAAAGCACAAAAATGAGGTTGAATCGTGTTTTGAATATGTCATCAATGTGATTGATCAAGAAGGCGAATTTCGTGTTTTGTTTCATCCTCTTGAGAAGGCATTGTCTTGCAGTTGTAGGAAGTTTGAGAACTGCGGTATATTGTGTTGTCATGCCTTAAAGGTGCTTGATACCAATGAAATAAAAACTATTCCTAATCGGTACATTTTGAAGAGGTTGACTAAAGATGCTCGAAGTGGTGTTATAGAAGATCCTAAGTTAGCTCGCATGCTACGATATAGACAACTTTGCCCCAAGCTTGTCAAGTTAGCATCTGAAGTTGCTGATTCTGAACAAGAATTCTTATTGGTCAGTAAAGCTGTGGAAGAATTGAGTAAGCAAGTCATGGAGCTTCGGTTGAGGACAAAAGATGACAATGAAGCTGTAAATCAAGTGAACTTTGAGGCACCTCAAGGCTATGAGAATCATTTGAACTTAGAGGAGTCCCTTGACCATCCTACACAGTCATTTGGAGACTCGGAGTTCTATGGTGATTTTTCAACTTACAATGTTCAAGCTAGTCAAAAATCATTGCTACATAGGTTTGATCCTAACTTCCCAGTTCTTTTCCAACATCGTCTTTATACTGCACACAGTGGGGTAGTTCACGCTTGTACTGCTTTCTAG 2040 0.3716 MGFGVRKLYTNKSKRDGSVTSCRFVCCKEGVRAKDKRDRPTVNPRPETRTNCKARMGLTCLNGKFKVYDLVEEHNHVLHSPKTTHMLASQRKISKVQAHEIELANDTELQQNVSYELFNRHVSGRDSLGYTCLDQTNYLQTRRQKSLMFGEAGCLLRYFQEQLLEDPSFYHAYQMDSEEKITNIFWADSTMLLDYGYFGDVVSLDTTSCINHAHRPLVIFSGLNHFKGVVIFGAALLYDETMPSFKWLFETFLEAHLQKKPQTIFTDQDQAIAKALHEVMPKAKHGLCIWHLMQNGIKHLGNLMKHESQFLKDFKTCIYEYEDETQFEAAWRRLLIDYNVQENTWLTLIYTLKEKWSACYMNIVFTLGIQSTQLSESLNVDFKRCLKPNIDIIEFLKNFERVVEDKRHNELKCEFESRQKLPKLKCEFSPMLKQVAEIYTPTIFDLFQDQFDMFQACSIKHKNEVESCFEYVINVIDQEGEFRVLFHPLEKALSCSCRKFENCGILCCHALKVLDTNEIKTIPNRYILKRLTKDARSGVIEDPKLARMLRYRQLCPKLVKLASEVADSEQEFLLVSKAVEELSKQVMELRLRTKDDNEAVNQVNFEAPQGYENHLNLEESLDHPTQSFGDSEFYGDFSTYNVQASQKSLLHRFDPNFPVLFQHRLYTAHSGVVHACTAF 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1990 679 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Sto7g1990 679 Pfam MULE transposase domain 201 295 IPR018289 -
Sto7g1990 679 PANTHER OS03G0181600 PROTEIN 1 591 - -
Sto7g1990 679 Pfam SWIM zinc finger 492 515 IPR007527 GO:0008270
Sto7g1990 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 591 IPR031052 GO:0006355
Sto7g1990 679 SMART 26again6 493 520 IPR006564 GO:0008270
Sto7g1990 679 ProSiteProfiles Zinc finger SWIM-type profile. 482 518 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1990 Sto-Chr7 25374759 25380358 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1990 MULE 5.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1990 - - ahf:112709060 699.508