Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1965 ATGTCCCCATATATTCCGAAAAGGGTTTTCAATGCTCCCTTGTTCGTTTGCTTTGACAAGATCAGTTTTCCCATTAAGATATTCCTCCTGAGGGGTGTGGTGTTATATTTTTCATTGATGGCGTCAAAGCCTTTCAAGAGGCCTGACTTATCTGAGatgatgatgaagcacAATTTGTCAGACCATCTGAAGCCAAATTACATAGCTCATACCAATCCCAAATCATCACCAAGTTCGGCAAACAAAGCCACAATAGACGCCGCCGATCCATCAAGTCCCAAACCCGGAACCAAGTTCGGCAACACTACTTCCGATCACCCCTCATTCCCGGCCCAACCAAAGCCCACCACCACTTTCGGCCCAGGGCCCAATACCACCACCGGAAACCACTCTCGTAGCGACAGTCTAGACAGCACAAGCAGCACCACTCCTCCTCCTACTCCTACTCCTCCCCCTACTCCCACTCCCATCAAGCCCCACACAGGCGGCGATGTTCGATGGGATGCGATCCAATCGGTTTCGAGGGGCTTCCCTCTGAATCTCAGCCATTTCAGGCTGCTCAAGCGATTGGGATTTGGGGACATTGGGAGTGTGTATCTCGTGGAGCTTAGAGGGACGAGGACTTACTATGCCATGAAAGTGATGGACAAGGCGTCACTAGCAAGCAGGAATAAGCTATTGAGGGCGCAGACGGAGAGGGAGATTCTGGGGCTTCTGGACCACCCGTTTCTGCCGACTCTGTATTCGTACTTCGAGACGGATAAGTTCTACTGCTTGGTCATGGAGTTCTGTAGCGGAGGCAATCTTCATTCTCTACGCCAGAAACAACCCAGCAAGCATTTTTCTGAAGAAGCTGCACGGTTCTATGCCTCGGAGATCTTGCTAGCCTTGGAGTACCTCCACATGCTAGGCATTGTCTATAGAGACCTAAAGCCGGAGAACGTCCTCGTGAGAGACGAAGGCCACATCATGCTCTCCGACTTCGACTTATCCCTCCGTTGCTCCGTCAGTCCCACACTCGTCAAGTCCTCCTCCGTCCATTCATCGTCATCGTCGTCGTCATCATCATACTCCAACACCAATAATACCAACACTAGCTACTCTTCTTCGTCTTCCATCTTGGACGACCACCACCACAGCGACGGCCACGCGGTAACCCAGACCGGCTGCATCCAGCCCTCCGCCTTCTTCTTCCCCCGCAGCATCCTCCCTTCCAAGAACAAGTCCCACCGCGGCAAGTCCAAGTCCGACGCCGGCGGCGGGCCCTCGCCGGCGTCCGGCCCGCTGCCGGAGCTCATGGCGGAGCCCACGAACGTCCGGTCCATGTCCTTCGTCGGCACGCACGAGTACCTCGCGCCGGAGATCATACGCGGCGAGGGCCACGGCAGCGCGGTGGACTGGTGGACGTTCGGGATATTCCTGTACGAGCTGCTGCACGGGACGACGCCGTTCAAGGGCGCCGGCAACCGCGCCACGCTGTTCAACGTGATTGAACAGCCGCTGAAGTTCCCGGATCACGCGCCGCACGTGAGCTCCAGCGCGCGTGACCTCATCAAGGGGTTGCTGGTGAAGGAACCCAACAAGAGGATCGCGTACACGCGAGGCGCGACGGAGATCAAACAGCATCCGTTCTTCGAAGGCGTGAATTGGGCTTTGGTGAGGAGTGCTTTACCGCCCCATATACCCGACCCGGTGGATTTTACCCAGTATGCTAATAAGGACCCGACCGCGGCGGCGAAGGTAGTAGATAAGAGGATGATAGATATTGCGAATGATAAGAATACCCATAATCCGGAATCTTCCTACATTGATTTTGAGTATTTTTAA 1827 0.5424 MSPYIPKRVFNAPLFVCFDKISFPIKIFLLRGVVLYFSLMASKPFKRPDLSEMMMKHNLSDHLKPNYIAHTNPKSSPSSANKATIDAADPSSPKPGTKFGNTTSDHPSFPAQPKPTTTFGPGPNTTTGNHSRSDSLDSTSSTTPPPTPTPPPTPTPIKPHTGGDVRWDAIQSVSRGFPLNLSHFRLLKRLGFGDIGSVYLVELRGTRTYYAMKVMDKASLASRNKLLRAQTEREILGLLDHPFLPTLYSYFETDKFYCLVMEFCSGGNLHSLRQKQPSKHFSEEAARFYASEILLALEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVSPTLVKSSSVHSSSSSSSSSYSNTNNTNTSYSSSSSILDDHHHSDGHAVTQTGCIQPSAFFFPRSILPSKNKSHRGKSKSDAGGGPSPASGPLPELMAEPTNVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLHGTTPFKGAGNRATLFNVIEQPLKFPDHAPHVSSSARDLIKGLLVKEPNKRIAYTRGATEIKQHPFFEGVNWALVRSALPPHIPDPVDFTQYANKDPTAAAKVVDKRMIDIANDKNTHNPESSYIDFEYF 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1965 608 PANTHER FLIPPASE KINASE 1-RELATED 125 608 - -
Sto7g1965 608 Gene3D Transferase(Phosphotransferase) domain 1 272 381 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 65 164 - -
Sto7g1965 608 PANTHER SERINE/THREONINE-PROTEIN KINASE AGC1-5 125 608 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 143 158 - -
Sto7g1965 608 ProSiteProfiles Protein kinase domain profile. 184 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1965 608 SMART serkin_6 184 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1965 608 Pfam Protein kinase domain 185 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1965 608 Pfam Protein kinase domain 441 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1965 608 SUPERFAMILY Protein kinase-like (PK-like) 181 570 IPR011009 -
Sto7g1965 608 Gene3D Transferase(Phosphotransferase) domain 1 399 564 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 343 373 - -
Sto7g1965 608 CDD STKc_phototropin_like 182 566 - -
Sto7g1965 608 Gene3D Phosphorylase Kinase; domain 1 179 271 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 343 379 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 69 86 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 95 142 - -
Sto7g1965 608 MobiDBLite consensus disorder prediction 405 432 - -
Sto7g1965 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1965 Sto-Chr7 25187981 25193712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1965 40 608 AGC Kinase Gene Family AT1G79250 59.661 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Sto7g1965 Pkinase 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1965 - - rcn:112168243 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1965 7 25187981 25193712 Sto7g1965 7 25187981 25193712 ECH