Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1962 ATGGGGAAGAAGCCGAAGCAGAAGGTGATTCTGCCTCCGGAACTCCCTCCGGAGATCATAGAGGACGAAGTTGAAGTTTCCGATGAAGACTTGCAGTTCGTTCAAGAGAACCGCGACTATGCCGGCTTAATTTCAACCTTAGACACTCAGTCCATAACCAAGCATGTTACTAGAGTTGCTGATGCCAAAGAGGATGAATTGGAGGCTCTTTATGAGAAACGCTTGAGAAAGAATGCTTTGAAGAAAGAAGTGGAGGAAAATAGTATTCAGGTTGATCGTGTAGATGCTCTTCCAGTGAAGACCTTGGATGGAAAACTCCATTACCGGACAGTTTCAAAGACAGAAAATGGTACGATTGAAGAAGAAACTGGAGGGGATGACGAGGATGCTAATGCAAATAAAGGCCTAATAAAGTTAAGTAAGGCTGAAAGGAGAGCTAAACTTaagaaagtgaagaaagagGCGAAAAAGCAAGGTAAAGAGGTGGCTAGTACAGAGGTGCAGCAAACACCACAAGCAGCAGTTCTGGCTGAGGTGAAAGAAGATCTTTCTGCTGAGGAGGCATTTGAAAATAAGAAGTTTAAACTTGCTGAGTTTGGAAATGCCTTGCTTGTTGACCCAGAATCCAATATTAAGTTGTTGAAGGATATGCTTCAAATCTCTAAGGAAAATGATCACAACATTGTTAAACTTGGACTTCTGTCACTCTTGGCTGTTTTCAAAGACATTATCCCTGGCTACCGGATTAGGCTTCCTACTGAAAAGGAACTTGAAATGAAGGTTTCTAAAACTGTCAGAAAGATGCGCTATTATGAATCGACTCTTCTTTCTGCATACAAGGGATACCTCCAAAGGCTAATAGCCTTAGAAAACCAGCCTTTCTTTCAGCATGTTGCAGTTCGATGTATTTGTACGTTGCTTGAAGCAAATCCCCATTTCAACTTTCGCGATAGCTTGTTAGGTGCTGTTGTCAGAAACATAAACTCTACAAAAGACGATATAAGAATTGTGGGTGAGGAATCCATCATTACTTCATTTACAATGGGAACTATACCATCATCAAAATTGACCCTTGAATATTGTGGGAAACTTGTCCTTGTTGGGCTTCATGTCATTTCTATCCCAGAGAATGCATGCACAAGGGCTTGTAATCTGTTCTCTATTACGAAACTATGTTGTTCTACAATTAAGTCACTATTTACAAATGAGGGTAAACACGGTGGTGAAGCTACTGTAGAGGCTGTTCGATTGATTGCTGAACATGTCAAAGCTCATAATTGCCAATTACACCCTGATTCCATTGAGgTTTTCCTGTCTCTGTCATTCGATGAGGATCTTAGGAAGTCTGAAAAGACAGATGAAGATCACAAATCCAGAAACAAGAAcaataagaagagaaaaaacaTGGAAGCATCAAATCATTTGCaagagaatgaaagaaagaaaagtagaCAAGAATTGATGTCAAAGATGAGAGAGGAGGTTGAAGCTGATTACAAGGCTGTATCTTTTACACCAGATGTTGCGGCCCGAAGACAAATGCAGTCTGAAACACTCTCTGCTGTATTTGAGACGTATTTTCGTATTTTGAAGCATACAATGGAGTCCATGGCTGCCAGACCTGAAGCAAATTCTGGGACACTATCTGCTGCAGTTGGATTCCACCCATTGCTTGCTCAATGTCTCAAAGGACTAGGAAAATTTTCACATCTGATTGACCTGGATTTCATGGGTGACCTTATGAACCATCTGAAAAAGCTTGCTTCTGATAGTAGGGACTCAAGCAACACTTCAGAGAAGTCTCTTAAATGTTTGACAGTTTCTCAGCGTCTCCAATGCTGCATTGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTGAATGTTGATTTACAGGACTTCTTTGTCCATCTTTACAATCTTATACTTGAATACAGGCCAGGAAGAGATCAAGGAGAGGTATTAGCAGAAGCTTTGAAGATGATGTTGTGCGAAGATAAGCAACATGACATGCAAAAGGCTGCTGCATTTATAAAACGTTTGGCTACAGTTTCATTGTGCTTCGGATCTCCTGAGTCAATGGCTGCCTTGGTCACAGTAAAGCATCTCCTGCAAAAGAATGTGAAGTGCAGAAATCTGTTAGAAAGTGACACTGGAGGAGGATCTATTTCAGGCACTGTTTATAAATATCAAGCAAATTCGACAGACCCCAGTCTAAGTGGTGCTCTTGCCTCAGTACTTTGGGACCTCTGTCTTCTGTCCAGGCATTACCATCCAGCCGTATCCACAACGTCCTCAGGTATTTCAAGCATGGGTACTGCTCATAACCAAGTCTTTCTCTCCAATATTTCTCCTCTACAAGCTTTTAAGGACTTGTCCCTTGAGCTAGAATTTCCTACCCCACAAAGTGGCAAGATTAAGTTAAATAACAGGAGGGAAAGAGCAAATGGTTCTAGCACATCTCCTTCAATTGGGGCTACTCCATTTACTAGCTCATTCAATGAGGATGAGTTGAGAGGGAAACTTACTTCGCATTTTGTGCTTCTACGTGACATAAAGGATAATGAGAGGCTGAGAAGTGAGTTAGATAGAACTACACTATCTCTTCAGCTTTTTGAACAATATAAGAAACAAAAGAAGCGaggattaaaaacaaaaagtaaagtgGCTGCTATTGCTTAG 2685 0.3993 MGKKPKQKVILPPELPPEIIEDEVEVSDEDLQFVQENRDYAGLISTLDTQSITKHVTRVADAKEDELEALYEKRLRKNALKKEVEENSIQVDRVDALPVKTLDGKLHYRTVSKTENGTIEEETGGDDEDANANKGLIKLSKAERRAKLKKVKKEAKKQGKEVASTEVQQTPQAAVLAEVKEDLSAEEAFENKKFKLAEFGNALLVDPESNIKLLKDMLQISKENDHNIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKGYLQRLIALENQPFFQHVAVRCICTLLEANPHFNFRDSLLGAVVRNINSTKDDIRIVGEESIITSFTMGTIPSSKLTLEYCGKLVLVGLHVISIPENACTRACNLFSITKLCCSTIKSLFTNEGKHGGEATVEAVRLIAEHVKAHNCQLHPDSIEVFLSLSFDEDLRKSEKTDEDHKSRNKNNKKRKNMEASNHLQENERKKSRQELMSKMREEVEADYKAVSFTPDVAARRQMQSETLSAVFETYFRILKHTMESMAARPEANSGTLSAAVGFHPLLAQCLKGLGKFSHLIDLDFMGDLMNHLKKLASDSRDSSNTSEKSLKCLTVSQRLQCCIVAFKVMRNNLDALNVDLQDFFVHLYNLILEYRPGRDQGEVLAEALKMMLCEDKQHDMQKAAAFIKRLATVSLCFGSPESMAALVTVKHLLQKNVKCRNLLESDTGGGSISGTVYKYQANSTDPSLSGALASVLWDLCLLSRHYHPAVSTTSSGISSMGTAHNQVFLSNISPLQAFKDLSLELEFPTPQSGKIKLNNRRERANGSSTSPSIGATPFTSSFNEDELRGKLTSHFVLLRDIKDNERLRSELDRTTLSLQLFEQYKKQKKRGLKTKSKVAAIA 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1962 894 Coils Coil 67 87 - -
Sto7g1962 894 Pfam CBF/Mak21 family 611 764 IPR005612 -
Sto7g1962 894 SUPERFAMILY ARM repeat 212 670 IPR016024 -
Sto7g1962 894 Coils Coil 461 486 - -
Sto7g1962 894 Coils Coil 148 168 - -
Sto7g1962 894 MobiDBLite consensus disorder prediction 116 136 - -
Sto7g1962 894 MobiDBLite consensus disorder prediction 448 484 - -
Sto7g1962 894 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Sto7g1962 894 PIRSF Noc3 380 890 IPR016903 -
Sto7g1962 894 PIRSF Noc3 1 347 IPR016903 -
Sto7g1962 894 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 4 816 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1962 Sto-Chr7 25167404 25176046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1962 1 863 Core DNA Replication Machinery Family AT1G79150 55.760 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1962 K14834 - gmx:100776136 1139.41