Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1917 ATGGAAGATGTGAATTATGACAATCTCAACCATGATTTCGCTATCCGAAGGTTCGGCCCTGCAAGAATGGAGCAAGAGCAAGGAGATCAAGAGGCAACAACAGCAACAACCAAAATGATGATACCTACTGATGAAGAAGCTGATGAACTTTCTTCTTCAGATGTTGATGATTTTGTTTATAGCTTCATCAATATGGACCATCacggtgatgatgatgatgggtaTGTCGACGAGATTGACCAACAGGGGTTGGTTCTAGTGGAAGGAACTAGTCTTTCACAACGTAATGACCCCAAGTTCGAATCCTCGTTGGGAGAGGTACCCACATTTATTATCCAACAGTgcctcgaacaggattgcctccatAGGAGCATACCTGTGAAAAACCAAACAAACGACGAGATTGTTCCAATCACCAAtatggaggaggaggaagaagaattgGAGATAATGAAAGGATGTTTTGGTACTAAACCTGAGCTTTGTATGGACCAAGGATTAGATTTGGTTCATATGTTATTGGCTTGTGCTGAAGCTGTGGGATGCAGAGACACTCAAAAAGCATATTTTCTGCTTAGAAAAATTTGGGCTTTGGCTAATCCTTGTGGTGATTCAATACAAAGAGTCTCCTATTGTTTTGCTTCAGGATTAAAGTGTAGGTTGTCACTTCTTCCTCACAATGTCTTTGCAAATAGTACACTAAAGACTATTACTACTATGGATGCCTCTTTGGTGACTAGGGAAAAGAAGTTGGAAGCTTTTCAACTTCTTTACCAAACTACACCTTATATTGCTTTTGGTTATATGGCTGCAAATGATGCTATATGTGAGGCATTACAAGGGAAGAGCTCTTTACATGTAATTGATCTAGGAATGGAACATACACTCCAATGGTCTTCCCTAATAAGAGCTCTTGCATCGAGGCCCGAGGGGTCTCCAAGGCTCCGGATAACGGGGTTAATCAACGATGATGAAAACGAACCGAGACTTCGGTCTTGCATGAGCTTGCTTATGGAGGAAGCAAGCTCATTTGGAATACCTCTTGAGTTCTACATAGTATCAGAGCCTGTAACTCCGTCGGTTCTAACCAAGGAGAAGTTGAACTTGAGAGAAGGAGAAGCCTTGTTTGTTAATAGCATCTTGTACCTGCACAAGTATGTCAAAGAAAGTAGAGGCTATCTCAAGGCAATACTCCAATCAATCAAGAAGTTGTGCCCCACTGCTCTTATTGTGGTAGAACAAGACTCTAACCACAACGGGCCTTTCTTCCTGGGGAGATTTTTGGAATCAGTACACTATTACTCTGCCATTTTTGACTCTCTTGAGGCAAGCATGCCCAGGAATAGCCCACAGAGGATGAAGATAGAAAGATTACATTTCGCGGAAGAGATTCACAATATTGTGGCGTATGAAGGTCCTCATAGGGTTGAACGACACGAAAGCGTAGATCGATGGCGAAGGCAGTTAGGTCGAGCAGGGTTTCATGTCATGGCCCTGAAGTGCACAAGTCAAGCCAGAATGATGCTCTCTATTTATGACAGTGAGGGATATACATTGTCCTGTGAGAAGGGTTGCCTTTTGCTTGGTTGGAAAGGAAGGCCAATTATGATGGCTTCTGCTTGGCAAGTAGCAAGAAGAAAGAGGAAGCAGAATATTAATCATGCTCTTATTCAATGTCATAGGAGAAAAGGAAACCTCTTTTCCTTCAAGATCAAACGCCACCTGAAAATTGATCTGCGCAATATTTCCAAGAATAGAAATCCTATCACTGGGGATTACCAGCAAGCAAAGCAAGTCATCATGGAAAGTGAACATATTTCCAGGATGCAACTTCAGGACAGCGTTTGTGAAATGAAGCACAAATCCAACGTCCTCCATGCCAGATTCATATCTAAAACACAAATCAAACGGGTCGGGAAGCAAACAGTAGGAGAATTTGTGGCCGATTCGGTCACCGAGTTGGGAAACCAGAGAGAGGGGCCCACCTCCAAGACCGGCGATTCCTGTGTTTTCTGCGAACTCGTTGTCGCGCCCGCATCCGAACACGGTCGTCATTGGAGCATTGCCACGTGTTCCTGTGTCGAAGCTGATAGTCTCAGTGGCCAAGTCTCCTATGGTGTAAGATTGATCCCCATATCTGTAGAAGCATGTTTGGGCAAGGAACTACAAGGTGGTGAGTCACAAGGCAGCACCATGAAAGTGGAAGATTTTGCTGCGTCAAATGCGTATTGTGGATCACACTGGGCACAAGGCAAGCATGGTACCCAAACAAGGTCACTTCCTGTGTCTGCAGCTGCATGA 2301 0.425 MEDVNYDNLNHDFAIRRFGPARMEQEQGDQEATTATTKMMIPTDEEADELSSSDVDDFVYSFINMDHHGDDDDGYVDEIDQQGLVLVEGTSLSQRNDPKFESSLGEVPTFIIQQCLEQDCLHRSIPVKNQTNDEIVPITNMEEEEEELEIMKGCFGTKPELCMDQGLDLVHMLLACAEAVGCRDTQKAYFLLRKIWALANPCGDSIQRVSYCFASGLKCRLSLLPHNVFANSTLKTITTMDASLVTREKKLEAFQLLYQTTPYIAFGYMAANDAICEALQGKSSLHVIDLGMEHTLQWSSLIRALASRPEGSPRLRITGLINDDENEPRLRSCMSLLMEEASSFGIPLEFYIVSEPVTPSVLTKEKLNLREGEALFVNSILYLHKYVKESRGYLKAILQSIKKLCPTALIVVEQDSNHNGPFFLGRFLESVHYYSAIFDSLEASMPRNSPQRMKIERLHFAEEIHNIVAYEGPHRVERHESVDRWRRQLGRAGFHVMALKCTSQARMMLSIYDSEGYTLSCEKGCLLLGWKGRPIMMASAWQVARRKRKQNINHALIQCHRRKGNLFSFKIKRHLKIDLRNISKNRNPITGDYQQAKQVIMESEHISRMQLQDSVCEMKHKSNVLHARFISKTQIKRVGKQTVGEFVADSVTELGNQREGPTSKTGDSCVFCELVVAPASEHGRHWSIATCSCVEADSLSGQVSYGVRLIPISVEACLGKELQGGESQGSTMKVEDFAASNAYCGSHWAQGKHGTQTRSLPVSAAA 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1917 766 ProSiteProfiles GRAS family profile. 160 542 IPR005202 -
Sto7g1917 766 Pfam GRAS domain family 169 542 IPR005202 -
Sto7g1917 766 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 545 IPR005202 -
Sto7g1917 766 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1917 Sto-Chr7 24711407 24720416 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1917 164 545 GRAS Transcription Factor Family AT1G66350 36.598 1.48e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto7g1917 GRAS 1.3e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1917 - - gmx:100814931 639.802