Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1898 atgggttttggagTAAGGAGGTTATTTACAAACAAAAGTAAGAAAGATGGATCAATCACTACTTGTAGGTTCGTTTGTTGCAAAGAAGGAGTAAGAAGAGCAAATAAAGGAGTTCATAATGTTGTGAATCGTCGACTGGAAACAAGAACCGATTGCAAAGTTAAAATAGGACTTGTGAATGAGGATGGGAAATTTAAAGTGTATGATTTTGTGGAGGAGCATAACCATGTTTTACATCTTCCAAATACAACACACATGCTGCCCTCTCATCGTAGGATATCAGACGTCCAAGCACAGGAGATTGAATTGGCTGCAGATTCTGGGTTACAACAAAGAGCGGCATATGAATTTCTTAGTAGAGAAGCAGGTGGAAGAGGTAATCTAGGCTTTACTCGTTTGGATTTGAAGAACTATCTACGAACTAGGAGACAAAAGAGTTTGATAGACGGTGAAGCTGGTTGTTTATTGAGATATTTTCAAGATCAGAAATTCAAAGATCCATTATTTTTCTATGATTTTCAAATGGATAATGAAGACCAAATAACCAACATTTTTTGGGCTGATTCAAGAATGATCTTGGACTATGGTCATTTTGGAGATGTAGTCTCTTTTGATACAACATATTGTATCAACAATGCACATAGGCCACTTGCTATATTTTCAGGATTCAATCATTTCAAGGGAGGGGTAATTTTTGGGGCAGCTATGTTGTATGATGAGACAGCGGTATCTTTCAAGTGGTTGTTTGAGACTTTTTTGAAAGCCAATTTGCAAAAAAGACCCCAGACGATATTCACTAATCAGGATCAAGCTATGGCTAAGGCATTACGTAAGGTTATGCCTGAGGTTTACCACGGTTTATGCACTTGGCATCTAATGCAAAATGGCATCAAACACCTAGGCAACTTGATGAAAGGAGGGTCTCATTTTCTACGGGACTTTAAGTCCTCTGCAAAGGTGTACACTCCTCCTATATTTGACGAGTTTCAATATGAATTCAACATTTCCCTTGCTTGttctataaagtataaacatgaGAGTGAAGCAGGCTTTGAATATGGCATCATTATTGTTGGTCGAGAAGTAGAATTTAGAGTATTGTTTAATCCTCCTCTAAAGGCGGTGTCTTGTAGTTGTAAGAGGTTTGAAAACTTTGGTATATTATGTGGTCATGCCTTAAAGGTACTTGAtgttaatgaaattaaaattgttcCTGATCAGTACATTTTGGGGAGATGGACAAAAAATGCTCGGAGTGATGTTATACTAGATGTTAAGGAGAATGAAGTTGAGCAAGATTCTAAGCTAATTCGAATAAGACGACATAGACAACTTTGGCCTGATCTTGTATATTTAACATCTGAAGTGATTGATTCTGAAGAAGGATTCTTGTTGGTCGCAAAAGGTCTGAAAGATTTGCGTAAGCAAGCCGAGGAGCTTCTCGAAAGGGAAAAAGATGTGAACAATTTCAAGGATGATTCTATACCACCCATGAGTGCATGCACGTCACAACCAATGAGTGCATCCTCTTCACAGCCCATGGGTGCATCCTCTTCACAACCCATGGGTGCATCCTCATCACAACCAAAGGGGATCAAGAAAAGGCAAGGCAATAAGAGGACGAGATGCTATAAAATTGGGTTGGTCAGAGGAAAAGGACACAAAGGGTCCCAAATTCGCATAGTTAGAGATCTATAG 1698 0.3787 MGFGVRRLFTNKSKKDGSITTCRFVCCKEGVRRANKGVHNVVNRRLETRTDCKVKIGLVNEDGKFKVYDFVEEHNHVLHLPNTTHMLPSHRRISDVQAQEIELAADSGLQQRAAYEFLSREAGGRGNLGFTRLDLKNYLRTRRQKSLIDGEAGCLLRYFQDQKFKDPLFFYDFQMDNEDQITNIFWADSRMILDYGHFGDVVSFDTTYCINNAHRPLAIFSGFNHFKGGVIFGAAMLYDETAVSFKWLFETFLKANLQKRPQTIFTNQDQAMAKALRKVMPEVYHGLCTWHLMQNGIKHLGNLMKGGSHFLRDFKSSAKVYTPPIFDEFQYEFNISLACSIKYKHESEAGFEYGIIIVGREVEFRVLFNPPLKAVSCSCKRFENFGILCGHALKVLDVNEIKIVPDQYILGRWTKNARSDVILDVKENEVEQDSKLIRIRRHRQLWPDLVYLTSEVIDSEEGFLLVAKGLKDLRKQAEELLEREKDVNNFKDDSIPPMSACTSQPMSASSSQPMGASSSQPMGASSSQPKGIKKRQGNKRTRCYKIGLVRGKGHKGSQIRIVRDL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1898 565 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 2 318 - -
Sto7g1898 565 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 334 487 - -
Sto7g1898 565 MobiDBLite consensus disorder prediction 485 540 - -
Sto7g1898 565 ProSiteProfiles Zinc finger SWIM-type profile. 364 400 IPR007527 GO:0008270
Sto7g1898 565 Pfam MULE transposase domain 201 295 IPR018289 -
Sto7g1898 565 Coils Coil 467 490 - -
Sto7g1898 565 Pfam SWIM zinc finger 365 397 IPR007527 GO:0008270
Sto7g1898 565 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 318 IPR031052 GO:0006355
Sto7g1898 565 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 334 487 IPR031052 GO:0006355
Sto7g1898 565 SMART 26again6 375 402 IPR006564 GO:0008270
Sto7g1898 565 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Sto7g1898 565 MobiDBLite consensus disorder prediction 495 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1898 Sto-Chr7 24582360 24584409 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1898 MULE 2.2e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1898 - - cam:101505629 415.231