Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1892 atgggttttggagTAAGGAGGTTATTTACAAACAAAAGTAAGAAAGATGGATCAATCACTACTTGTAGGTTCGTTTGTTGCAAAGAAGGAGTAAGAAGAGCAAATAAAGGAGTTCATAATGTTGTGAATCGTCGACTGGAAACAAGAACCGATTGCAAAGTTAAAATAGGACTTGTGAATGAGGATGGGAAATTTAAAGTGTATGATTTTGTGGAGGAGCATAACCATGTTTTACATCTTCCAAATACAACACACATGCTGCCCTCTCATCGTAGGATATCAGACGTCCAAGCACAGGAGATTGAATTGGCTGCAGATTCTGGGTTACAACAAAGAGCGGCATATGAATTTCTTAGTAGAGAAGCAGGTGGAAGAGGATTCAATCATTTCAAGGGAGGGGTAATTTTTGGGGCAGCTATGTTGTATGATGAGACAGCGGTATCTTTCAAGTGGTTGTTTGAGACTTTTTTGAAAGCCAATTTGCAAAAAAGACCCCAGACGATATTCACTAATCAGGATCAAGCTATGGCTAAGGCATTACGTAAGGTTATGCCTGAGGTTTACCACGGTTTATGCACTTGGCATCTAATGCAAAATGGCATCAAACACCTAGGCAACTTGATGAAAGGAGGGTCTCATTTTCTACGGGACTTTAAGTCCTGTATGTATCAATATGAAGAGGTACTTGAtgttaatgaaattaaaattgttcCTGATCAGTACATTTTGGGGAGATGGACAAAAAATGCTCGGAGTGATGTTATACTAGATGTTAAGGAGAATGAAGTTGAGCAAGATTCTAAGCTAATTCGAATAAGACGACATAGACAACTTTGGCCTGATCTTGTATATTTAACATCTGAAGTGATTGATTCTGAAGAAGGATTCTTGTTGGTCGCAAAAGGTCTGAAAGATTTGCGTAAGCAAGCCGAGGAGCTTCTCGAAAGGGAAAAAGATGTGAACAATTTCAAGGATGATTCTATACCACCCATGAGTGCATGCACGTCACAACCAATGAGTGCATCCTCTTCACAGCCCATGGGTGCATCCTCTTCACAACCCATGGGTGCATCCTCATCACAACCAAAGGGGATCAAGAAAAGGCAAGGCAATAAGAGGACGAGATGCTATAAAATTGGGTTGGTCAGAGGAAAAGGACACAAAGGGTCCCAAATTCGCATAGTTAGAGATCTATAG 1197 0.3952 MGFGVRRLFTNKSKKDGSITTCRFVCCKEGVRRANKGVHNVVNRRLETRTDCKVKIGLVNEDGKFKVYDFVEEHNHVLHLPNTTHMLPSHRRISDVQAQEIELAADSGLQQRAAYEFLSREAGGRGFNHFKGGVIFGAAMLYDETAVSFKWLFETFLKANLQKRPQTIFTNQDQAMAKALRKVMPEVYHGLCTWHLMQNGIKHLGNLMKGGSHFLRDFKSCMYQYEEVLDVNEIKIVPDQYILGRWTKNARSDVILDVKENEVEQDSKLIRIRRHRQLWPDLVYLTSEVIDSEEGFLLVAKGLKDLRKQAEELLEREKDVNNFKDDSIPPMSACTSQPMSASSSQPMGASSSQPMGASSSQPKGIKKRQGNKRTRCYKIGLVRGKGHKGSQIRIVRDL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1892 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 228 320 - -
Sto7g1892 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 126 227 - -
Sto7g1892 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 2 101 - -
Sto7g1892 398 Pfam MULE transposase domain 126 199 IPR018289 -
Sto7g1892 398 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Sto7g1892 398 MobiDBLite consensus disorder prediction 318 373 - -
Sto7g1892 398 Coils Coil 300 323 - -
Sto7g1892 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 228 320 IPR031052 GO:0006355
Sto7g1892 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 101 IPR031052 GO:0006355
Sto7g1892 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 126 227 IPR031052 GO:0006355
Sto7g1892 398 MobiDBLite consensus disorder prediction 328 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1892 Sto-Chr7 24533629 24535680 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1892 MULE 5.6e-16 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1892 - - tss:122643517 261.922