Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1874 ATGAAAAGAGCAGATCAAATCAAACTTGAAAAACATATCAAAAGCTTCTGGTTATGCCATTCTCTGCTTACTCTGGAAAATGCTAACATGGAGCTTGATTGGAAGCCTAAAGTGGGTATGGTATTTGATAGTATGGACAATGCTTGGAAGTTTTGGTCAGATTATGGTAGTAAAATGGGATTTGGAGTTAGAAAGAATTACTGCAACAAGAGCAAAAAGGATGGATCGACAACTTCTTGTCGATTTGTATGTTGTAAAGAAGGGATAAGAGCAAAAAATAAGAGGGATTATGTAACGAATAATCCTCGACATGAGACGAGAACTGACTGCAAAGCAAGAATTGTGCTTAGTCATTTGAATGGAAAGTTGACAATGAATGAATTTGTAGAGGAGCATAACCATGTACTCCATCTTGCAGAAACTACACACACATTGCGTCTCAACAGCGCATGTCTGATGTCCAAGCACATGAACTTGAGTTGGCTAATGATTCTAGGATCCAACAAAGAGCCACTATTGCACGGATGGGCAAGCATGTCGAGGGACGACTGA 552 0.3949 MKRADQIKLEKHIKSFWLCHSLLTLENANMELDWKPKVGMVFDSMDNAWKFWSDYGSKMGFGVRKNYCNKSKKDGSTTSCRFVCCKEGIRAKNKRDYVTNNPRHETRTDCKARIVLSHLNGKLTMNEFVEEHNHVLHLAETTHTLRLNSACLMSKHMNLSWLMILGSNKEPLLHGWASMSRDD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1874 183 Pfam FAR1 DNA-binding domain 50 136 IPR004330 -
Sto7g1874 183 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 28 146 - -
Sto7g1874 183 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 28 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1874 Sto-Chr7 24345414 24346500 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1874 FAR1 6.2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1874 - - lja:Lj4g3v0654370.1 166.777