Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1873 ATGGAGCTTGATGGGAAGCCTAAAGTGGGGATGCAATTTGATAACTTGGAGAGTGCTTGGAAATTTTGGAAGAGCTATGGTGGTAAAATGGGATTTGGGGTTAGGAAGGATTTTTCCAACAAGAGCAAAAAGGATGGTGCAATAACTTCTTGTCGATTTGTATGTTCTAAAGAAGGGAACTCGGCAAATCCATTGTTCTTTCATAAATTTCAAATGGATTCAGATGAGCaaataacaaacatattttGGGCCGATGTAAGAATGCAACTAGACTATGCTTATTTTGGTGATGTTGTCTCTCTCGATACAACATATTGCACGAACAATGCACATAGGCCGCTTGCCttgttttcaggatttaatcATCACAAAGGAGTTGTTATTTTTGGGGCTGCATTGTTATATGACGAGACGACAGCATCATTCAAGTGGTTATTTGAGATGTTCTTGAAGGTACATAATCAGAAAAAACCTCAAACCATCTTCACTGATCAAGACCGAGCAATGGCTAAAGCCCTACAAGAGGTGTTGCCTGACACATACCACGGATTATGCACATGGCATCTGATGCAGAATTGCATTAAGCACTTAGGCAACTTAATGAAGCATGGGTCTCATTTCTTACGAGACTTCAAGGCTTGTATGTATGAGTATGAGGAAGAGAAAGAGTTCGAAGAGGCTTGGAGTCAGTTACTCTCAGATTATAATGTACATGAAAACACATGGGTAGAATCAGTTTATTCCTTGAAGGAAAAATGGGCAGCTTGTTATATGAAGAAAGTATTTACATTAGGCATGCGGAGCACACAACTTAGTGAGAGCTTGAATGCAGATGTTAAAAGGTGCTTGAATCCAGATGTTGATATTATTCAATTCTTTAAACACTTTGAACGAGTGGTTGAGGACAAAAGATATAATGAATGGAAGTGTGAATTTGAGGCAAGAGAAAAGTTGCCAAGATTGAGATGTCCAAGTTCGCCCATGCTCCAGCAACTTGCAGAAGTCTACACTCCTATCATTCTTGATATGTTCCAAGATCAATTTGACTTGTTTTCGGCTTGTTGTATAAAGCAAAGAAGGCAAAGTGAGTCATTAATTGAATATGTCATTGATATGTATAAGCACAAGGGAGAGTGGGAAGTCTTGTTTCATACTCAAGAGAAATCAGTTTCTTGCACTTGTAGGAGGTTTGAGACCTTTGGTATATTGTGTTGCCATGCTTTGAAAGTGTTTGAGGCCAACGATGTCAAGTTAGTTCCTGATCAATACATTTTGAAAAGGTGGACAAAGATGGCCAGAACTGGTATTATATTTGATGTCAATGGGAATGAGGTTGAGGAGGACCCAAAATTTGGTCATACGCTTGAAATTAGATCTCTTTGCCAACGTTTTGTCAAGCTAGCTTCCGAAGTCACGGGTAAAGATGAAGTCTTGATACTTCGTTCAGCTACGGAGGAAATGATCAAGAAAGTTGAGGCACTTCGTTTGGGGAAAATACGTGGGACAAATGAGAGTGATGATCCTATAATACCTAGTAGCAATGACATGTCAATACCAACCGGCATCAAGAAGAGGGTTGGAATTAAAAGAAGGAGTCGTCCAAAGAGTAGGGTTGAGCTTCAACTTCGAAATAGAAAAGCTTCAAGGTCTAGATCACATCCAACATTCACACATTCTCAAAGTGAATCCACAGATATTGGAGCTTCAAGTCTAGTGCAATTGGAGAATTCATTTAGTTTTACGAGATTGTTAATGGACCAAAGTGAAGGATCGGTCTCTCTTGGAGCATTAGAGTTTGGTGGTGACAAGCTATGA 1815 0.3901 MELDGKPKVGMQFDNLESAWKFWKSYGGKMGFGVRKDFSNKSKKDGAITSCRFVCSKEGNSANPLFFHKFQMDSDEQITNIFWADVRMQLDYAYFGDVVSLDTTYCTNNAHRPLALFSGFNHHKGVVIFGAALLYDETTASFKWLFEMFLKVHNQKKPQTIFTDQDRAMAKALQEVLPDTYHGLCTWHLMQNCIKHLGNLMKHGSHFLRDFKACMYEYEEEKEFEEAWSQLLSDYNVHENTWVESVYSLKEKWAACYMKKVFTLGMRSTQLSESLNADVKRCLNPDVDIIQFFKHFERVVEDKRYNEWKCEFEAREKLPRLRCPSSPMLQQLAEVYTPIILDMFQDQFDLFSACCIKQRRQSESLIEYVIDMYKHKGEWEVLFHTQEKSVSCTCRRFETFGILCCHALKVFEANDVKLVPDQYILKRWTKMARTGIIFDVNGNEVEEDPKFGHTLEIRSLCQRFVKLASEVTGKDEVLILRSATEEMIKKVEALRLGKIRGTNESDDPIIPSSNDMSIPTGIKKRVGIKRRSRPKSRVELQLRNRKASRSRSHPTFTHSQSESTDIGASSLVQLENSFSFTRLLMDQSEGSVSLGALEFGGDKL 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1873 604 ProSiteProfiles Zinc finger SWIM-type profile. 379 415 IPR007527 GO:0008270
Sto7g1873 604 PANTHER OS03G0181600 PROTEIN 7 62 - -
Sto7g1873 604 PANTHER OS03G0181600 PROTEIN 63 497 - -
Sto7g1873 604 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 62 IPR031052 GO:0006355
Sto7g1873 604 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 63 497 IPR031052 GO:0006355
Sto7g1873 604 SMART 26again6 390 417 IPR006564 GO:0008270
Sto7g1873 604 Pfam SWIM zinc finger 385 413 IPR007527 GO:0008270
Sto7g1873 604 Pfam FAR1 DNA-binding domain 21 61 IPR004330 -
Sto7g1873 604 Pfam MULE transposase domain 98 192 IPR018289 -
Sto7g1873 604 MobiDBLite consensus disorder prediction 526 567 - -
Sto7g1873 604 MobiDBLite consensus disorder prediction 553 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1873 Sto-Chr7 24342224 24344294 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1873 MULE 1.1e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1873 - - sspl:121809115 568.155