Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1863 ATGGGGCATAGTTCAAGGAAGAAGAAGCGTGGAGGAGGTAGTGGGAGGAGAAGTAAGGGAAGAGCACCTTTGAAGGATCACGTATCTCAATCTAGTGGCGATGATAATGAACTCTCGGAAGAAATTACTGCTTTATGTGGAATTTTCCAAGAGGACTGCAAGATTCTTCCTGGATCACCTCCTCAAATAGTTATAAATCTCAGACCCTATTCAAAGGACATGGGGTATGAGGATGTAGATGTTTCTGCTGTTCTTGTTGTTAGGTGTTTACCTGGGTATCCTTTCAAGTGTCCGAAGTTGCAAATTACTCCTGAGAATGGTTTATCAGAAAGTGATGCTGATAAACTTTTGTCTCTCCTCCACGATCAGGCTAATTTAAATGCCAGGGAGGGAAGAGTAATGATCTTTAATTTGGTGGAGGCTGCTCAAGAATTTATGTCTGGAATTGAGCCAGTTGGAAAAGCAAATGATTCTAAGCTTTTGCGTTCAACAAAGGAATGTAATGAAGAATTGTTTCTGAAGGATATAGGGGCTTCAAATAGGAGTTCTTTTATATATGGTTTCATAGATCTCTTCAGTGGCTATGCAGAATCATGGAATTGGGGTTTCGGAATGGATGATACTAATGGGAAAAGTTCTTCTGTCACACCCTCAAAGTTAGATGCCTCAGAACATGTTTATGAGGCTGAAAAGAAAAAATCTGATAGAAAGCAAGAGCCATTTAAAAatcaagaaacaaagaaaggccCATTAGTGTCTCAAACTTCCAAATTAGATGCCTCGGGGGAAAATGGTGAAGAAAGCAACAAGAGCATGTCTTTGTCTAATACAAGTGGATCTCATGCAGAGGAACTAGATTCTATCCTTGACGAGTATACATCAGATGATTACGACGAAGGCATTTATGCAAGTGCAACTTCAGAGTCTGAGTCTTCTACTTCCATGGCTCATCATCAAGCATCTCAAACAGTTGAAAAGGATCTGATAGTGGTTCACCTGCTTCACCTTGCTTGTGGTTCACAAGGACCATTGGCTAACTCTTTGCCACACATAGCTACAGAGCTGTACAATTTAGGGATAATTTCTGATTGGGCAAGGGATATGGCATCTAAACCATCTTCCGCATTTAACAAAACCTTTAATCATGTTTTCCAGAAACACTTGGATTCATCCAGAATATCTCAGTTTTGGAAACCATCTGATCTTGGAGGCCCAACTACAGTTCCCCCAAGTTCTCGATATCTTAATGACTTTGAGGAGTTACGGCCTCTAGGTCATGGTGGTTTTGGCCATGTTGTGTTGTGCAAAAACAAACTTGACGGAAGGCAATATGCAGTAAAGAAAATTCGCCTCAAGGACAAAAGCATTCCTATTAAGATAATTAGGGAAGTTGCAACTCTGTCTCGTTTGCAGCATCAACACGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTCGCTGATTCTAATGGTGATGCTACATGGGGTTCGAGGACTCCAATGAGCTCCAGTTTTAGTTTTAAAGCTTCGAGCTTTCCAGATGCCCTTGGGAATGAGAATCAGCTTGAATCAACATACCTTTACATTCAAATGGAGTATTGCCCCAGGACCCTCCGCCAGGTATTTGAATCATACACTCATTTTGACAAAGAACTAGCATGGCATTTGTTTCGTCAAATAGTGGAAGGCTTGGCACACATACATGGACAGGGAATAATTCATCGAGATTTGACACCAAGTAACATATTTTTTGATGCTCGAAATGATATCAAGATTGGCGATTTTGGTCTTGCCAAGTTTCTGAAGTTGGAGCAGTTGGATCAAGATCCAGGACATCCTACTGATATAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGAACCTATTTCTATACAGCTCCTGAAATAGAACAAGGATGGCCTAAGATTGATGAAAAGGTTGACATGTACAGCTTAGGAGTGGTTTTCTTTGAGCTTTGGCACCCATTTGGCACTGCAATGGAGAGACACGTTGTATTAACTGATCTGAAACAGAAAGGAGAACTGCCTTCCACTTGGGTTGCCAAATTTCCAGAACAGGCAGCCTTGCTGCGGAAGTTAATGTCTCCAAGTCCATCTGATCGTCTTTCTGCCACAGAACTTTTACAATGCGTGTTTCCTCCACGAATGGAGTCTGAGTTATTAGATGATATTCTACGATCAATGAAGACATCAGAGGACACAAGCATATACGATAAAGTTGTAAATGCTATCTTCGATAAAGAGCTGTCGAGTGCAAAAGAACAACTTTATCAGGCTGGTAGATCAGGGTCAGTTGGCAATAACAGTTCTTCCATTCTATGCACAGATTTAGAAACTGAAGTTCGTGATAATGTAGTAGATGTCACAAGGGAAGTATTCAGGCAGCATTGTGCCAAGCACCTAGAAATATTAGCAATGGGATTATTGGATGATTTTCCACAGTacaaatccAGAAATGCAGTCAAACTTTTGACCCATGGAGGAGACATGCTTGAACTTTGTCATGAGCTGCGTTTGCCTTTTGTAAATTGGGTTATATCTAACCAGAAATTTTCGTTCAAACGATATGAGATATCATGTGTCTACAGAAGAGCAGTTGGTCACTCACCACCAAACCGCTACCTTCAGGGCGATTTTGACATTATTGGTGGTACCTCAGCATTAACTGAGGCAGAGGTCATAAAGGTGACCAGGGATATAGTCACTTGTGTTTTTCCTGCAGACTCATGTGACATTCATCTAAATCATGGTGACCTTCTGGATGCAATTTGGTCATGGATTGGAATCAAGACTGAGAACAGAGTTAAAGTGGCAGAGCTTCTTTCATTGATGGGTTCTTTGCGTCCACAATCCTCTGCAAGGAAATCAAAATGGGCTGTGATACGGAGGCAACTTTTACAGGAACTTAATTTAGCAGAAGCTATTGTAAATAGGTTACAGACAGTAGGTTTAAGATTCTGTGGAGCTGCGGATCAGGCACTTCCTAGACTAAGAGGAGCTCTACCATCTGATAAACGTACACGAAAGGCACTTGATGAATTGTCTGAGCTTTTCAGTCTCTTAAGAGTATGGAGGATTGACAATAATGTTTATGTAGATGCATTAATGCCCCCAACTGAAAGTTATCACAGAGACTTATTCTTCCAGGTATACTTAACCAAGGAAAATAATCCTGGATCAATCCCAGAAGGTGTCTTGCTGGCTGTTGGTGGACGCTATGACTATCTGCTTCATCAGATGTGGAACCGTGACTATAAAACAAATCTTCCGGGTGGTGTAGGAACTAGCCTTGCACTGGAGACAATAATTCAGAATTGTCCAGCAGATTTTAAGCCCATTAGAAATGAAGCCAGCACCAGTATTCTTGTTTGTTCAAGAGGAGGTGGTGGTCTGCTAATGGAGCGCATGGAACTAGTGGCTGAATTATGGGAGGAGAACTTTAAGGCTCAATTTGTTCCCACCCCTGATCCAAGTCTTACGGAGCAGTATGAGTATGCCAATGAGCACGACATCAAGTGTCTTGTCATCATCACAGATCAGACAAGTTTTGGTTGTTTTGAATTCCAGGTTCGTCACCTTGAACtcaagaaggagaagcaagTTGAGAGAGAGAACATAGTCAAGTTTCTATCGAATGCTATCACAACACAATTTAGAAATCCCTCCATTTGGATCTGA 3705 0.4089 MGHSSRKKKRGGGSGRRSKGRAPLKDHVSQSSGDDNELSEEITALCGIFQEDCKILPGSPPQIVINLRPYSKDMGYEDVDVSAVLVVRCLPGYPFKCPKLQITPENGLSESDADKLLSLLHDQANLNAREGRVMIFNLVEAAQEFMSGIEPVGKANDSKLLRSTKECNEELFLKDIGASNRSSFIYGFIDLFSGYAESWNWGFGMDDTNGKSSSVTPSKLDASEHVYEAEKKKSDRKQEPFKNQETKKGPLVSQTSKLDASGENGEESNKSMSLSNTSGSHAEELDSILDEYTSDDYDEGIYASATSESESSTSMAHHQASQTVEKDLIVVHLLHLACGSQGPLANSLPHIATELYNLGIISDWARDMASKPSSAFNKTFNHVFQKHLDSSRISQFWKPSDLGGPTTVPPSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSIPIKIIREVATLSRLQHQHVVRYYQAWFETGVADSNGDATWGSRTPMSSSFSFKASSFPDALGNENQLESTYLYIQMEYCPRTLRQVFESYTHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDPGHPTDITGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKVDMYSLGVVFFELWHPFGTAMERHVVLTDLKQKGELPSTWVAKFPEQAALLRKLMSPSPSDRLSATELLQCVFPPRMESELLDDILRSMKTSEDTSIYDKVVNAIFDKELSSAKEQLYQAGRSGSVGNNSSSILCTDLETEVRDNVVDVTREVFRQHCAKHLEILAMGLLDDFPQYKSRNAVKLLTHGGDMLELCHELRLPFVNWVISNQKFSFKRYEISCVYRRAVGHSPPNRYLQGDFDIIGGTSALTEAEVIKVTRDIVTCVFPADSCDIHLNHGDLLDAIWSWIGIKTENRVKVAELLSLMGSLRPQSSARKSKWAVIRRQLLQELNLAEAIVNRLQTVGLRFCGAADQALPRLRGALPSDKRTRKALDELSELFSLLRVWRIDNNVYVDALMPPTESYHRDLFFQVYLTKENNPGSIPEGVLLAVGGRYDYLLHQMWNRDYKTNLPGGVGTSLALETIIQNCPADFKPIRNEASTSILVCSRGGGGLLMERMELVAELWEENFKAQFVPTPDPSLTEQYEYANEHDIKCLVIITDQTSFGCFEFQVRHLELKKEKQVERENIVKFLSNAITTQFRNPSIWI 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1863 1234 ProSitePatterns Protein kinases ATP-binding region signature. 424 448 IPR017441 GO:0005524
Sto7g1863 1234 PANTHER EIF-2-ALPHA KINASE GCN2 20 1234 - -
Sto7g1863 1234 PANTHER HISTIDYL-TRNA SYNTHETASE 20 1234 - -
Sto7g1863 1234 CDD STKc_EIF2AK4_GCN2_rpt2 411 718 - -
Sto7g1863 1234 SUPERFAMILY Protein kinase-like (PK-like) 414 724 IPR011009 -
Sto7g1863 1234 ProSitePatterns Tyrosine protein kinases specific active-site signature. 573 585 IPR008266 GO:0004672|GO:0006468
Sto7g1863 1234 ProSiteProfiles RWD domain profile. 40 149 IPR006575 GO:0005515
Sto7g1863 1234 MobiDBLite consensus disorder prediction 19 34 - -
Sto7g1863 1234 Pfam RWD domain 37 145 IPR006575 GO:0005515
Sto7g1863 1234 Coils Coil 971 991 - -
Sto7g1863 1234 MobiDBLite consensus disorder prediction 223 244 - -
Sto7g1863 1234 Gene3D Phosphorylase Kinase; domain 1 407 534 - -
Sto7g1863 1234 Gene3D Ubiquitin Conjugating Enzyme 28 155 IPR016135 -
Sto7g1863 1234 MobiDBLite consensus disorder prediction 1 36 - -
Sto7g1863 1234 Gene3D Transferase(Phosphotransferase) domain 1 537 727 - -
Sto7g1863 1234 SUPERFAMILY Class II aaRS and biotin synthetases 785 1113 IPR045864 -
Sto7g1863 1234 Gene3D Bira Bifunctional Protein; Domain 2 783 1120 IPR045864 -
Sto7g1863 1234 SUPERFAMILY Class II aaRS ABD-related 1128 1224 - -
Sto7g1863 1234 Pfam Histidyl-tRNA synthetase 868 1111 IPR041715 -
Sto7g1863 1234 MobiDBLite consensus disorder prediction 1 16 - -
Sto7g1863 1234 Gene3D - 1125 1225 IPR036621 -
Sto7g1863 1234 MobiDBLite consensus disorder prediction 210 280 - -
Sto7g1863 1234 SMART RWD2001b 40 149 IPR006575 GO:0005515
Sto7g1863 1234 MobiDBLite consensus disorder prediction 247 280 - -
Sto7g1863 1234 ProSiteProfiles Protein kinase domain profile. 418 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1863 1234 SUPERFAMILY UBC-like 36 146 IPR016135 -
Sto7g1863 1234 Pfam Protein kinase domain 418 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1863 1234 Pfam Anticodon binding domain of tRNAs 1130 1226 IPR024435 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1863 Sto-Chr7 24179935 24254849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1863 407 721 MAP Kinase Kinase Kinase AT1G63700 25.460 6.81e-21 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Sto7g1863 Pkinase 3.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1863 K16196 - gmx:100797996 1879.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1863 7 24179935 24254849 Sto7g1863 7 24179935 24254849 ECH