Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1821 ATGTACCCGAAACGGTCTAGCCAAGGCAATGGCCCTATTTCTGGACCAGTGCGCACGAGTGATAGGATCAAGACAAGACCAAACATATATGGTCGACCATTCTTGTATTACAACTCAAAGCGCACTAGAAAAGGCAAGAACAAGACAAGAACAGCAGCTTCACAGATTGCCAAGATGTTACGTCCAAGGGACCGGCCAGCACAAGGTTCAAATGCTAATTCCGCCTCTAGCAATCTTCGGCGTTCAACTAGGAAGAGAAGGATTTCTGTAAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTAATGAGGCCCAGATATCAACAACTGAGAAACCAGATTGACCAAAGTGTGAGTCAGGATGAGTTGATGTCCCACAAGCGCAAAAGAGCTGCGGAAACTAAACCAAACCCTCGACGTGAAGGTCTGCGGCCTCGTCGTTCAAAGGTTACTATAAGAGAACACTTAAATTCAGAGTCAGATGATGAGCAAGATCTTTCAGAAGAGAAGGTTGGACAAGATGATACAGAAAATGGGAATGATGTTGAGGAAAATGATGCAGATGATGGCCAAAATGAGATTGAAGGAGATGTTGAGGGTGAAGATGAAGGtgaggatgaggatgatggagatgaagatggtgatgatgaagaGGGTGAAGAAGAGCAAGATGGAAGAAGGCGCTATGATCTTCGGAATCGTGCAGATGTTCGCAGATTCTCAATAGAGGAAGGAAAGACCCGACCAAGATCACCTCGAAGAGTGTTACATCAAGGTATGGGCACTAAGGTCAGTAGGGATGTTAGGAGGGGAGGATCAAGAGTTCATAAGCGGCATCGTTTAACAAGACCTGAAGATTCTGATGACTCCCTCCTTGTGGATGAGCTAGATCAAGGCCCTGCTGCTATTCCATGGAGTCGAGGTGGCAGCAGATCTGCCCCACCCTGGCTTTTTGGCGGATTAGACATGCATGGAACTACAGCTTGGGGATTGAATCTTGCTGCATCAGGTTGGGGGCATCAGGGTGATGCTTTAGCTACCTTGACATCTGGGATTCAAACTGCTGGACCAAGCTCTAAGGGAGGTGCagatatacaacccttacaggTTGACGACAATGTTAGTTTTGATGATATAGGTGGGCTCTCTGAATACATTGATGCTCTAAAGGAAATGGTTTTCTTTCCATTACTGTATCCAGATTTCTTTGCGAGTTATCACATCACTCCACCTAGAGGGGTGTTGTTATGTGGGCCCCCTGGCACTGGTAAAACATTAATTGCAAGAGCTTTAGCTTGTGCTGCTTCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGTAAAGGGGCTGACGTTCTAAGCAAGTGGGTGGGTGAGGCTGAAAGACAATTGAAATTACTCTTTGAGGAAGCACAAAGGAATCAACCTTCTATTATCTTCTTTGACGAAATAGATGGACTTGCTCCTGTGAGGTCTAGCAAGCAAGAACAGATTCACAATTCTATTGTGTCCACTTTGCTTGCTTTAATGGATGGTCTTGATTCCCGTGGACAAGTTGTTTTAATAGGAGCCACCAACAGGATTGATGCTATCGATGGAGCCTTGCGGCGCCCTGGAAGATTTGATCGTGAATTTAACTTTCCCTTGCCTGGTTGTGAGGCACGTGCTGAAATATTAGATATTCATACCCGTAAGTGGAAGCATCCTCCATCAAGGGAATTGCAAAAGGAACTTGCAGCTAGTTGTGTAGGATACTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAAGCTGCCATTCGTGCTTTCCGTGAAAAATATCCACAGGTTTATACAAGTGATGACAAATTTTTAATAGATGTTGATTCGGTCATGGTTGAAAAATATCACTTTATTGAAGCAATGTCAACAATAACTCCTGCTGCTCATAGAGGTGCAATTGTGCATTCTAGGCCATTGTCTCTGGTTGTTCAACCATGTTTACAAAAACATCTAAAGGAAGCCATGAATATTATATCTGATATTTTTCCTCCAGTTGCTGTTGCATCAGAATTGACCAAACTTTCTATGCTTTCCTATGGTTCTGCCATTCCACTTGTGTATCGGCCTAGGCTTTTACTTTGTGGTGGTGAAGGTACTGGGCTGGACCATCTTGGGCCTGCGGTTTTACATGAACTGGAAAAATTTCCCGTTCATTCATTAGGACTTCCATCTCTACTCTCAGATCCAAGTGCAAAGACACCAGAGGAGGCTTTAGTTCATATATTTAGTGAAGCTAGAAGAACAACACCATCTATTCTCTATTTACCGCAGTTTGATGTTTGGTGGGAAACTGCACATGAACAGCTCAGGGCAGTTCTCCTGACTTTAGTAGAAGAATTGCCTTCTGATTTCCCTATATTACTACTTGGAACATCCTCAGCCCCACTTGATGAAGTTGATGAAGTGCCTCCTTCATTGTTCCCTCATCGTTCAGTCTATAACATGAACATACCATCTATTGAAGATAGAACATCATTTTTCAATTGTTTGGTAGAGGCTGCTTTGTCTGTTTTGTCGGAGGGAACAAGCAAAACATCCCAGGATACAGGTTCCATTCCTGAACTTCCTAAGGCACCAAAGTTAGCTAGTGGTCCAAAGGCATCTGAGCTAAAAGCAACTGTAGAAGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACAGGTATTACAACTGTTAG 2748 0.4305 MYPKRSSQGNGPISGPVRTSDRIKTRPNIYGRPFLYYNSKRTRKGKNKTRTAASQIAKMLRPRDRPAQGSNANSASSNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPRYQQLRNQIDQSVSQDELMSHKRKRAAETKPNPRREGLRPRRSKVTIREHLNSESDDEQDLSEEKVGQDDTENGNDVEENDADDGQNEIEGDVEGEDEGEDEDDGDEDGDDEEGEEEQDGRRRYDLRNRADVRRFSIEEGKTRPRSPRRVLHQGMGTKVSRDVRRGGSRVHKRHRLTRPEDSDDSLLVDELDQGPAAIPWSRGGSRSAPPWLFGGLDMHGTTAWGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDNVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKHPPSRELQKELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVMVEKYHFIEAMSTITPAAHRGAIVHSRPLSLVVQPCLQKHLKEAMNIISDIFPPVAVASELTKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFSEARRTTPSILYLPQFDVWWETAHEQLRAVLLTLVEELPSDFPILLLGTSSAPLDEVDEVPPSLFPHRSVYNMNIPSIEDRTSFFNCLVEAALSVLSEGTSKTSQDTGSIPELPKAPKLASGPKASELKATVEAEQHALRRLRMCLRDVCNRYYNC 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1821 915 Gene3D - 681 848 IPR027417 -
Sto7g1821 915 PANTHER BNAC08G44480D PROTEIN 1 912 - -
Sto7g1821 915 SMART AAA_5 414 555 IPR003593 -
Sto7g1821 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 702 850 IPR027417 -
Sto7g1821 915 MobiDBLite consensus disorder prediction 125 164 - -
Sto7g1821 915 MobiDBLite consensus disorder prediction 1 15 - -
Sto7g1821 915 Gene3D - 554 639 - -
Sto7g1821 915 ProSitePatterns AAA-protein family signature. 523 541 IPR003960 GO:0005524|GO:0016887
Sto7g1821 915 MobiDBLite consensus disorder prediction 225 255 - -
Sto7g1821 915 CDD AAA 414 553 - -
Sto7g1821 915 Pfam ATPase family associated with various cellular activities (AAA) 418 553 IPR003959 GO:0005524|GO:0016887
Sto7g1821 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 641 IPR027417 -
Sto7g1821 915 MobiDBLite consensus disorder prediction 859 883 - -
Sto7g1821 915 Gene3D - 376 646 IPR027417 -
Sto7g1821 915 MobiDBLite consensus disorder prediction 182 224 - -
Sto7g1821 915 Pfam AAA+ lid domain 580 617 IPR041569 -
Sto7g1821 915 PANTHER AAA DOMAIN-CONTAINING 1 912 IPR045199 -
Sto7g1821 915 MobiDBLite consensus disorder prediction 1 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1821 Sto-Chr7 23707154 23712202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1821 364 618 Calmodulin-binding Proteins AT3G56690 37.452 7.12e-42 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1821 K22531 - gmx:100787765 1495.72