Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1800 atgggttttggagTAAGGAGGTTATTTACAAACAAAAGCAAGAAAGATGGATCAATCACTACTTGTAGGTTCGTTTGTTGTAAAGAAGGAGTAAGAAGAGCAAATAAAAGAGTTCATAATGTTGTGAATCGTCGACAGGAAACAAGAACCGATTGCAAAGTTAAAATGGGACTTGTGAATGAGGATGGGAAATTTAAAGTGTATGATTTAGTGGAGGAGCATAACCATGTTTTATATCTTCCAAATACAACACACATGTTGCCCTCTCATCGTAGGATATCAGACGTCCAAGCACAGGAGATTGAATTGGCTGCAGATTCTGGGTTACAACAAAGAGCGGCATATGAGTTTCTTAGTAGAGAAGCAGGTGGAAGAGTGATTGATTCTGAAGAAGGATTCTTGTTGGTCGCAAAAGATCTGAAAGATTTGCGTAAGCAAGCCGAGGAGCTTCTCGAAAGGGAAAAAGATGTGAACAATTCCAGGGATGATTCCATACCACCCATGAGTGCATGCACGTCACAACCAATGGGTGCATCCTCATCACAACCAAAGGGGATCAAGAAAAGGCAAGGCAATAAGAGGACGAGATGCTATAAAAATTGGAGCACAAATCGAGAAATCAAGATGCTTACCTCTCAGATAAATCTAGAAACCGCGATGTTACGAAGCATAGAAACGGTGGCAGTGGAGTCCGATGACGATGTGGAGGAATATTATTTGAGAGTCCCCCGGGAGGCAGAAATTTGGAAGAGGCAAAGCTCTGATAAAAGACCAATGAGCAGCTTCATGATTGCGTTGGGAGATCTTGACACTCTAGTAGCTGATGTGGCAGGACTTAAATCCAAAGTTCATAAGAGGAAGAGACCTGAAAGTAGTTCCGCACATTGGAGTGAAGAACACGAAGATGAATGGGAGCAACCATGGAATCAAAGGGATTTTGCGAAACTCCCATATACAAATGGATTTTCCCAAGTTCGATAG 981 0.4139 MGFGVRRLFTNKSKKDGSITTCRFVCCKEGVRRANKRVHNVVNRRQETRTDCKVKMGLVNEDGKFKVYDLVEEHNHVLYLPNTTHMLPSHRRISDVQAQEIELAADSGLQQRAAYEFLSREAGGRVIDSEEGFLLVAKDLKDLRKQAEELLEREKDVNNSRDDSIPPMSACTSQPMGASSSQPKGIKKRQGNKRTRCYKNWSTNREIKMLTSQINLETAMLRSIETVAVESDDDVEEYYLRVPREAEIWKRQSSDKRPMSSFMIALGDLDTLVADVAGLKSKVHKRKRPESSSAHWSEEHEDEWEQPWNQRDFAKLPYTNGFSQVR 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1800 326 Coils Coil 137 160 - -
Sto7g1800 326 Pfam FAR1 DNA-binding domain 1 78 IPR004330 -
Sto7g1800 326 MobiDBLite consensus disorder prediction 151 194 - -
Sto7g1800 326 MobiDBLite consensus disorder prediction 290 305 - -
Sto7g1800 326 MobiDBLite consensus disorder prediction 162 186 - -
Sto7g1800 326 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 181 - -
Sto7g1800 326 MobiDBLite consensus disorder prediction 281 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1800 Sto-Chr7 23501003 23513093 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1800 FAR1 3.2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1800 - - lja:Lj4g3v0620710.1 148.673