Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1794 ATGGCCGAAACTCCTAGGAAGTCTCTTCGATCTCCCTCTAAATGCAAACCCTCAACTTCACTAAGCCCCGTAACCCCACAATCTCTAACTCCTCGCAGATCAACCCGCCGAAACTCGCTGGCTTTCGAGTTCATCAGTCCTCAGAAGCCTCTCGATCACATTGATAAAGTTTTTGAACATTCATTGAAAAGTCCAAAGAAGGGAAAAACCATGGAGAGTGTAGATTTGAAGAGATCTCGTCGATCAATTGATTATTCTACAAGGGGTGAAAATTTAAAGCGTAGAAATGGTAAAGTATCAGTTGAGGTTTTTATCGCTCCAGCATCGCCTTATCAATCGgaaagtaagaagaggaagagggttGATGAGAGAACGGTTGTCACTAGAGCTATGGCTGCAAAAAATGGGAAATCTCAGAAGGGGCAAAAGAACAACAGGCTACCTAAGAAACGGGTGTATTATAAAAAAGTGATATATGATGGGGGTGAGTTTGGAGTGGGCGATGCTGTTTATGTGAAGAGGAGAGAAGACACCGAATCAGATAATGATGACCCAGAAGTGGAGGAATGTAGGTTGTGCTTTAGTTCAGGGAATGATATCATGATTGAGTGTGATGATTGTTTAGGTGGGTTTCATCTGAAATGTTTAACTCCACCATTAAAGGAGGTTCCAGACGGAGATTGGATTTGTGGGTTTTGTGAGGCTCGTAAGATGGGTAGAGACGTTAACTGTCCAATGCCCCCACAGGGTAAGAAGTTAGTTAGGACATTCAGGGAGAAGCTTCTTTCAAGTGATTTGTGGGCTGCTCACATTGAAAGTATATGGAAGGAAGTAGATGGTAGCTATTGGTGTCGAGTAAGGTGGTACGTGATTCCCGAAGAGACTGCTGTTGGGAGACAACCTCATAACCTGAGGAGGGAGCTATATAGAACAAACGATTTTGCAGACATTGAGATGGAATCTGTCCTTAGACATTGCTTTGTCAAGACCCCGAAAGAATTTGCAAAGGCCAACAATGATGGAGatgatattttcttttgtgaatatGAATATGACATCCATTGGCACAGTTTCAAGCGACTTGCTGAGATTGACAATGACAAAGAGGATGGTGAAGTGTCTGACAGTGATGAAGATTGGAATCTTTGCAATGAAGCAGACTCTGATACAGATGATGATGTTGAATACGAagatgagaatataaaaaattcacAATGTCATTCATCAGCAACTCATGCATTAGCTGCAAATTTACGCAAGGGACAGTTCTTTGGACTTCAAAAGATAGGTACCAAAAAAATTCCACAGTTTGTAAGGACCCACAAACAGACTGATCTTGAGAGGGCAAAGGCTATGCTGCTGTTGGCATCATTGCCTAAATTTTTACCTTGTAGGAATAAAGAAATGGAGGAGATAACTTCATTCATAAAAGGTGCTATCTGTGACGATCAATGTCTGGGACGTTGCTTGTACATTCATGGTGTTCCTGGAACCGGCAAGACAATGAGTGTACTATCAGTAATGAAGAATCTGAGGTCAGAAGTTGATGCAGGAACCATAAGGCCCTATTGTTTTGTGGAGATTAATGGTCTGAAATTGGCATCTCCAGAGAACATTTACAAGGTCATATATGAGGCATTAAATGGGCACAGGGTCAGCTGGAAAAAGGCCCTTCACTTGCTGAATGAGAGATTTgtagaaggaaaaaaaacaggAGAAGAGGCCGATCGGCCTTGCATTCTACTTATTGATGAACTTGATCTTCTTGTAACCAGAAACCAATCGGTTCTTTACAATATTCTTGATTGGCCTACTAAGCCGCATTCCAAACTAATCGTGATAGGGATAGCAAATACCATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCGAGTCGAATGGGCATCCAGAGGCTTTGCTTTGGCCCATATAATTATCAACAGCTTCAAGAAATCATTTCAAGCCGGTTGAAGGGAGTAGATGTATTTGAAAAGCAAGCTATAGAATTTGCTTCAAGAAAGGTTGCAGCAATATCAGGAGATGCCCGTCGTGCTTTGGAGATATGCAGACGTGCTGCAGAAATTGCAGATTATCGTATTAAGAAACTAACTGCAAATCCAGACTTAGCTGCTGCAGGAAAGGAACTCGTTGCAATGGCAGATATTGAAGCTGCCATTCAAGAAATGTTCCAAGCTCCTCATATTCAAGTGATGAAAAGCTGTTCTAGTCTTAGCAAAATCTTCCTGACAGCCATGGTGCATGAGCTATATAAAACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTGTCCTGTCTCTGTACCAGCAACGGAGAAGTGTTTCCTGGATATGATACACTCTTGCAAGTTGGCTCCTCCCCAGGTTTAGCAAAgctcctcccatggcttccTTCAACCCTTCTCTCTCCTACACTTTCTCTGTCCTCCCTTGCACGCACCCTCTCTGCAAGCCTCGCGAGTGAAGGtgaaggagaggaggaggaagaagaagagtga 2526 0.4054 MAETPRKSLRSPSKCKPSTSLSPVTPQSLTPRRSTRRNSLAFEFISPQKPLDHIDKVFEHSLKSPKKGKTMESVDLKRSRRSIDYSTRGENLKRRNGKVSVEVFIAPASPYQSESKKRKRVDERTVVTRAMAAKNGKSQKGQKNNRLPKKRVYYKKVIYDGGEFGVGDAVYVKRREDTESDNDDPEVEECRLCFSSGNDIMIECDDCLGGFHLKCLTPPLKEVPDGDWICGFCEARKMGRDVNCPMPPQGKKLVRTFREKLLSSDLWAAHIESIWKEVDGSYWCRVRWYVIPEETAVGRQPHNLRRELYRTNDFADIEMESVLRHCFVKTPKEFAKANNDGDDIFFCEYEYDIHWHSFKRLAEIDNDKEDGEVSDSDEDWNLCNEADSDTDDDVEYEDENIKNSQCHSSATHALAANLRKGQFFGLQKIGTKKIPQFVRTHKQTDLERAKAMLLLASLPKFLPCRNKEMEEITSFIKGAICDDQCLGRCLYIHGVPGTGKTMSVLSVMKNLRSEVDAGTIRPYCFVEINGLKLASPENIYKVIYEALNGHRVSWKKALHLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGVDVFEKQAIEFASRKVAAISGDARRALEICRRAAEIADYRIKKLTANPDLAAAGKELVAMADIEAAIQEMFQAPHIQVMKSCSSLSKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCTSNGEVFPGYDTLLQVGSSPGLAKLLPWLPSTLLSPTLSLSSLARTLSASLASEGEGEEEEEEE 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1794 841 Gene3D - 445 639 IPR027417 -
Sto7g1794 841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 455 701 IPR027417 -
Sto7g1794 841 MobiDBLite consensus disorder prediction 1 37 - -
Sto7g1794 841 MobiDBLite consensus disorder prediction 11 37 - -
Sto7g1794 841 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 115 799 - -
Sto7g1794 841 Gene3D - 256 444 IPR043151 -
Sto7g1794 841 Pfam BAH domain 270 359 IPR001025 GO:0003682
Sto7g1794 841 Pfam PHD-finger 190 235 IPR019787 -
Sto7g1794 841 SMART AAA_5 486 640 IPR003593 -
Sto7g1794 841 Gene3D - 640 726 - -
Sto7g1794 841 CDD AAA 467 643 - -
Sto7g1794 841 ProSitePatterns Zinc finger PHD-type signature. 190 233 IPR019786 -
Sto7g1794 841 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 243 IPR013083 -
Sto7g1794 841 ProSiteProfiles BAH domain profile. 245 362 IPR001025 GO:0003682
Sto7g1794 841 SMART BAH_4 162 362 IPR001025 GO:0003682
Sto7g1794 841 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 115 799 IPR020793 -
Sto7g1794 841 Pfam ATPase family associated with various cellular activities (AAA) 491 636 IPR003959 GO:0005524|GO:0016887
Sto7g1794 841 SMART PHD_3 189 234 IPR001965 -
Sto7g1794 841 ProSiteProfiles Zinc finger PHD-type profile. 187 236 IPR019787 -
Sto7g1794 841 SUPERFAMILY FYVE/PHD zinc finger 176 239 IPR011011 -
Sto7g1794 841 Pfam AAA lid domain 664 697 IPR041083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1794 Sto-Chr7 23406099 23417268 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1794 6 803 Core DNA Replication Machinery Family AT4G14700 61.787 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Sto7g1794 AAA 5.9e-20 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1794 K02603 - gmx:100798547 1212.21