Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1793 ATGGAAGTCCATTACAATAACATCAGCTATCCCTATAGTACAGCCGGAAGCTTTATTGAATATTTTGAAGGTCTCACATATGAACATgtcaatttcatttttaatggTGCTTCACATGCTCAGGAGAGTTTTTACCCATCAACTACTAGTTTCTACAAGTTTGGACTATCTGAACATGATAGTACTTCATACTATCGTGAAAGTCATGGTTATGAGGCCAATCATCATGAACCACAGATTGATGAGTATAGAAGGCCAGCAGAGAACTCGTCAACAATCAGTGACCAGACAGCCACAGCAAGCATGGAATGGGGAGAAGCTTATAATTTGAACAATCCTATCCCTTTTCTTTCAGGTCCAAGAAGACATCATAATTCCCACAATTACCAGGAATTACTCGAGTTAGGTGAGGCTGTTGGAACTCAAAACCGTGGTCTCTCCCAAGAGCAAATCTCTTTGCTTCCAGTTTCGAAGTACAAATGTGGGttcttttttaggaaaaaatcaCGGGATGAGAGATGTGTGATTTGCCAGATGGAATATAAAAGAGGGGATAAGCGGATCACTTTACCATGTAAACATGTCTATCATGCTAGTTGTGGGAACAGATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACACGGAGGTGTTTGCTAACCTGTCAAAACACAAATAA 681 0.3862 MEVHYNNISYPYSTAGSFIEYFEGLTYEHVNFIFNGASHAQESFYPSTTSFYKFGLSEHDSTSYYRESHGYEANHHEPQIDEYRRPAENSSTISDQTATASMEWGEAYNLNNPIPFLSGPRRHHNSHNYQELLELGEAVGTQNRGLSQEQISLLPVSKYKCGFFFRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRWLSINKACPICYTEVFANLSKHK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1793 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 220 IPR013083 -
Sto7g1793 226 SUPERFAMILY RING/U-box 170 221 - -
Sto7g1793 226 SMART ring_2 174 214 IPR001841 -
Sto7g1793 226 Pfam Ring finger domain 173 214 IPR001841 -
Sto7g1793 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 221 - -
Sto7g1793 226 ProSiteProfiles Zinc finger RING-type profile. 174 214 IPR001841 -
Sto7g1793 226 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 221 IPR033276 GO:0004842|GO:0016567|GO:0046621
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1793 Sto-Chr7 23366260 23369941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1793 2 225 C3H Transcription Factor Family AT3G63530 38.017 9.47e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1793 K19045 - gmx:100793907 374.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1793 7 23366260 23369941 Sto7g1793 7 23366260 23369941 ECH
Sto12g0102 12 688661 691421 Sto7g1793 7 23366260 23369941 ECH