Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1791 ATGGGATTGCGCCATATGGCGGGTAAGATTAATGCATATTGTTGCTGCGATTACTTCGTTAATAGGTTAAGGCCTTGGTTGTTATGTTATAGTTTGTTTTTAGCTTCTGTCTTGGGTCCAAATAGTGAAGTTGAATGGCGGAAAAAAATGGCTATCTCTTGTTTGTCAGCTGAGTTGTCTACAGACTTTAGTGATGACAAAACTGTTATTCAGTTCACTTTTGGTGACTTATTCATAATCCACTTTGTTGTTCTTTCTCTGGTTTATTTTCCTTCTGGAAAGGAGAGCAAAGACCAAGAACCAATGGAGTCTTGGTCTCAGAATACAGTATCAGAAGCTAATGGGATACATGATCTTAAGATACCGTTGTTGCAGACTTCACAAGATGACACAGTGAGGGAGGCTCATTTTAGAATAAAAGATATTAATTGTGCGTCCTGTGTAAATTCAGTAGAGTCGGTGGTTAGAAATCTTAATGGGATTGATTACTTTGTGGTGTCAGCACTTGATGGCCAAGCTATAGTCAAATATTTGCCAAAGCTCATTACTgccaagaaaataaaagaaacaatagAAGAAGCAGGTTTTAGAGTTGATGGGCTTTTGGAGCAAGACATATCAATATGCCGGGTCAGGATTAAAGGAATGGCATGCACAAGCTGCTCTGAGTCTGTTGAGCGTGCCCTTCAAATGGTTGATGGAGTTAAAAAGGCAGTAGTAGGTCTAGCTTTAGAAGAAGCAAAAGTGCATTTTGATCCTCATCTCACTGATGTTAACAGGATAATTGAAGCAATAGAAGATGCTGGCTTTGGAGCTGATATCATTAGCACTGGCACTGATGTGAACAAAGTACATCTAAGACTTGAAGGTGTTGATTCTCCAGATGATGTAAATGTTATAATGTCATCTCTTGAGTTGGCTGAAGGTGTGAATCATGTTGAAATGGACTTAATAGAACACAAAGTTACAGTTACCTATGATCCAGATGTTACGGGTCCAAGATTTCTTATACATTGCATTCAAGCAGCTGGCCATGGCCCCAAAGAGTATCAAGCAACCTTGTGTACTCATTCAGGACAAAGAGAATCAGGGAACATGTATGAAATACGTACATATAGGGACCAATTTTTGTTCAGCTGCTTATTTTCTGTTCCTGTGTTCTTATTTGCTATGGTGCTTCCCATGCTTCCTCCATATGGTAATTGGTTAAACTATAAGATCCACAATATGCTAACTCTTGGAATGTTTCTTCGATGGATCCTTAGCACACCTGTTCAGTTTGTAGTTGGAAAAAGGTTCTATGTTGGATCATATCATGCACTGAGACGAAGATCTGCCAACATGGATGTGCTGGTTGCACTAGGCACTAATGCTGCATATTTTTactctatttatattttaataaaagcaCTCACTTCAGTCACATTTCAAGGACAAGATTTCTTTGAGACCAGTTCCATGTTGATATCCTTTATTCTCTTAGGAAAATATTTGGAGGTTGTGGCTAGAGGGAAAACATCAGATGCTTTAGCAAAACTGACGCAGCTTGTTCCTGATAAAGCTTATTTGTTAGCCCTAGATGCTGACGGAAATGTCATCTCTGAGACAGAAATTGACACTCAACTTATACAAAGGAATGACATAATTAAGATTGTTCCCGGGGCCAAAATTCCTGTTGATGGTATTGTTATAAAAGGGCAAAGCTATGTAAATGAAAGTATGATCACTGGGGAAGCAAGACCTATTGATAAAAGTCAAGGAGACAagGTTATTGGTGGGACCATGAATGAGAATGGCTGCTTACTGGTCAAGGCCACACACGTTGGGTCAGAGACAGCACTTTCTCAAATTGTTCAGCTTGTGGAAGCTGCTCAACTTGCCAGAGCACCagttcaaaaacttgctgaccatatttcaaaagtttttgtTCCAATTGTGGTTCTTGCAGCATTTATAACCTGGTTGGTATGGTTTATTCCTGGGAAAGCCCATATTTACCCTAGACATTGGATACCAAAAGCTATGGATGAATTTGAGCTGGCTTTGCAGTTTGCTATTTCAGTGCTAGTTGTTGCCTGCCCATGTGCTCTGGGTCTAGCAACTCCAACAGCAGTGATGGTTGCTTCAGGTATGGGTGCTTCTCAAGGTGTGCTCATCAAGGGAGGAGATGCACTGGAAAAGGCACACAAGGTAGAAATTATTGTGTTTGATAAGACAGGGACACTTACAGCTGGAAAGCCAGAGGTAGTTAGTGCTGTGCTGTTTTCTGAATTTTCGATGGAAGAATTATGTGACAAGGCCATAGCTGTAGAGGCTAGCAGTGAACACCCAATAGCAAAAGCTGTTGTGGTTTATGCTAAGAGGCTGCGCCATAAGTTTGGGTCCTTCACTGAACAAGTCTTAGATGTGAACGACTTTAAGGTGCACCTGGGAGCTGGGGTAGGTGGAAAAGTTGAGGGGAGGACAGTTTTAGTTGGGAACAAAAGACTCATGCATTCTTTTAATATCCCAATATCTCCAGAGGTTGAGAGGTATATATCTGAAAATGAAGTTCTGGCTAGAACTTGTGTATTAGTTTCAATTGATGGAAAGATTGCTGGAGCTTTCTCTGTAACTGATCCTGTTAAGCCGGAGGCTAAGCGTGTAATATCATTTCTCCACTCCATGGGCATCTTAAGCATGATGGTGACTGGTGATAACTGTGCTACTGCAACTGCTATTGCAAATGAAGTTGGTATTGACGAAGTACATGCTGAGACTGATCCATTGGGAAAAGCTGATAAGATTAAAGACTTACAGGGGAAAGGCATGATCGTGGCGATGGTGGGTGATGGAATTAATGACTCACCAGCCTTAGTTGCAGCTGATGTTGGTATGGCAATTGGTGCTGGAACTGATATAGCTATAGAAGCAGCCGATGTAGTTCTTGTCAAAAGTAGCTTGGAAGATGTAATTACAGCCATAGATCTTTCCAGAAAGACCATGTCTCGCATCCGTCTGAACTACATCTGGGCTCTTGGTTACAACATACTTGGCATGCCAATTGCTGCCGGCATCTTGTACCCCTTCACCGGAATAAGGTTGCCACCGTGGCTTGCTGGTGCTTGCATGGCTGCCTCCTCTCTTAGTGTTGTTTCTTCATCTCTCTTGTTGCAGTTCTACAAGAAACCATTGCACGTAGAATCCACTTGA 3192 0.4057 MGLRHMAGKINAYCCCDYFVNRLRPWLLCYSLFLASVLGPNSEVEWRKKMAISCLSAELSTDFSDDKTVIQFTFGDLFIIHFVVLSLVYFPSGKESKDQEPMESWSQNTVSEANGIHDLKIPLLQTSQDDTVREAHFRIKDINCASCVNSVESVVRNLNGIDYFVVSALDGQAIVKYLPKLITAKKIKETIEEAGFRVDGLLEQDISICRVRIKGMACTSCSESVERALQMVDGVKKAVVGLALEEAKVHFDPHLTDVNRIIEAIEDAGFGADIISTGTDVNKVHLRLEGVDSPDDVNVIMSSLELAEGVNHVEMDLIEHKVTVTYDPDVTGPRFLIHCIQAAGHGPKEYQATLCTHSGQRESGNMYEIRTYRDQFLFSCLFSVPVFLFAMVLPMLPPYGNWLNYKIHNMLTLGMFLRWILSTPVQFVVGKRFYVGSYHALRRRSANMDVLVALGTNAAYFYSIYILIKALTSVTFQGQDFFETSSMLISFILLGKYLEVVARGKTSDALAKLTQLVPDKAYLLALDADGNVISETEIDTQLIQRNDIIKIVPGAKIPVDGIVIKGQSYVNESMITGEARPIDKSQGDKVIGGTMNENGCLLVKATHVGSETALSQIVQLVEAAQLARAPVQKLADHISKVFVPIVVLAAFITWLVWFIPGKAHIYPRHWIPKAMDEFELALQFAISVLVVACPCALGLATPTAVMVASGMGASQGVLIKGGDALEKAHKVEIIVFDKTGTLTAGKPEVVSAVLFSEFSMEELCDKAIAVEASSEHPIAKAVVVYAKRLRHKFGSFTEQVLDVNDFKVHLGAGVGGKVEGRTVLVGNKRLMHSFNIPISPEVERYISENEVLARTCVLVSIDGKIAGAFSVTDPVKPEAKRVISFLHSMGILSMMVTGDNCATATAIANEVGIDEVHAETDPLGKADKIKDLQGKGMIVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADVVLVKSSLEDVITAIDLSRKTMSRIRLNYIWALGYNILGMPIAAGILYPFTGIRLPPWLAGACMAASSLSVVSSSLLLQFYKKPLHVEST 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1791 1063 CDD HMA 286 353 IPR006121 GO:0046872
Sto7g1791 1063 PRINTS P-type cation-transporting ATPase superfamily signature 571 585 - -
Sto7g1791 1063 PRINTS P-type cation-transporting ATPase superfamily signature 735 749 - -
Sto7g1791 1063 PRINTS P-type cation-transporting ATPase superfamily signature 867 878 - -
Sto7g1791 1063 PRINTS P-type cation-transporting ATPase superfamily signature 889 899 - -
Sto7g1791 1063 PRINTS P-type cation-transporting ATPase superfamily signature 942 961 - -
Sto7g1791 1063 PRINTS P-type cation-transporting ATPase superfamily signature 965 977 - -
Sto7g1791 1063 SUPERFAMILY Calcium ATPase, transduction domain A 535 621 IPR008250 -
Sto7g1791 1063 Pfam Heavy-metal-associated domain 210 270 IPR006121 GO:0046872
Sto7g1791 1063 Pfam Heavy-metal-associated domain 137 196 IPR006121 GO:0046872
Sto7g1791 1063 Gene3D - 726 992 IPR023214 -
Sto7g1791 1063 SFLD p-type atpase 717 994 IPR044492 -
Sto7g1791 1063 Gene3D - 746 875 IPR023299 GO:0000166
Sto7g1791 1063 SUPERFAMILY Calcium ATPase, transmembrane domain M 480 728 IPR023298 -
Sto7g1791 1063 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 121 1060 - -
Sto7g1791 1063 ProSiteProfiles Heavy-metal-associated domain profile. 208 274 IPR006121 GO:0046872
Sto7g1791 1063 ProSiteProfiles Heavy-metal-associated domain profile. 283 349 IPR006121 GO:0046872
Sto7g1791 1063 CDD HMA 137 198 IPR006121 GO:0046872
Sto7g1791 1063 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 488 1019 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto7g1791 1063 Gene3D - 281 356 - -
Sto7g1791 1063 Gene3D - 208 278 - -
Sto7g1791 1063 Pfam E1-E2 ATPase 528 713 - -
Sto7g1791 1063 SUPERFAMILY HMA, heavy metal-associated domain 278 349 IPR036163 GO:0046872
Sto7g1791 1063 ProSiteProfiles Heavy-metal-associated domain profile. 134 200 IPR006121 GO:0046872
Sto7g1791 1063 SUPERFAMILY HMA, heavy metal-associated domain 129 198 IPR036163 GO:0046872
Sto7g1791 1063 Gene3D - 127 200 - -
Sto7g1791 1063 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 448 1051 IPR027256 GO:0006812|GO:0016021|GO:0019829
Sto7g1791 1063 ProSitePatterns E1-E2 ATPases phosphorylation site. 737 743 IPR018303 -
Sto7g1791 1063 SUPERFAMILY HMA, heavy metal-associated domain 205 277 IPR036163 GO:0046872
Sto7g1791 1063 Gene3D - 503 625 - -
Sto7g1791 1063 Pfam haloacid dehalogenase-like hydrolase 732 956 - -
Sto7g1791 1063 SUPERFAMILY HAD-like 733 1048 IPR036412 -
Sto7g1791 1063 CDD P-type_ATPase_Cu-like 376 1038 - -
Sto7g1791 1063 ProSitePatterns Heavy-metal-associated domain. 213 242 IPR017969 GO:0046872
Sto7g1791 1063 CDD HMA 211 272 IPR006121 GO:0046872
Sto7g1791 1063 PANTHER ATP7, ISOFORM B 121 1060 - -
Sto7g1791 1063 SFLD C1.7: P-type atpase like 717 994 - -
Sto7g1791 1063 PRINTS H+-transporting ATPase (proton pump) signature 942 958 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto7g1791 1063 PRINTS H+-transporting ATPase (proton pump) signature 973 998 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Sto7g1791 1063 TIGRFAM TIGR00003: copper ion binding protein 211 271 IPR006122 GO:0005507
Sto7g1791 1063 TIGRFAM TIGR00003: copper ion binding protein 136 198 IPR006122 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1791 Sto-Chr7 23330507 23336989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1791 192 344 Primary Pumps ATPases AT1G63440 29.487 1.58e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1791 K17686 - gmx:100793894 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1791 7 23330507 23336989 Sto7g1791 7 23330507 23336989 ECH