Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1741 ATGGGAACGTTCCAACAGATTAAGCCTTATGTTTATGCGAATGACTATTGCCAACAACTTAAGACAACTATTCCACAAACAGAAAATGCAAAGGAATACCTTAAGTTTGTGGAAGAACGCTTCCGCACTGCAGATAAGTCACTTGCTGCAAGATTAAGATCCTTGGGGATGACTGTGGAAGACTCGTTTATTGTTCAATTCATTTTGAACTCACTTCCTCCAAAATATGGGCCATTTCAAATCAATTATAACACTATTAAGGATAAGTGGGATATTAATGAATTGGCCAGTAAGCTTGTTCAGGAGGAAATGAGATTAAAGAAACATGTGAGTCATTCAGTGAACCTCATAGGTCAAGGAGCTGGAAAGGCACTGAAGCCAAAAGCCAACAAGTTTAAGACAGGAAAGACACCTGTTAATGCTCCTAATGTTGAAAGGAAAGACCAAAAGGCAAGCAAATGCCATTTCTGTGGGAAAGATGGTCACTTCCAAAAGGATTGTCTGAAAGGTAAAGCTTGGTTTGAAAAGAAAGGTAAGCCTAGTGCTTTATTATGTTATGAACCAAACTTAGCAGAATTTTCATATAATACTTGGTGGCTTGATTCTGGTGCTACTACTCATGTATGTAATATGATGCAGGGATTCCTTACGATCCAAACCATAAATCGAAATGAAAGTTTCTTATCTATGGGAAATCGCATGAAGGTTTCAGTTGAAGGCATAGGGACTTACCGATTGGTCTTAGATACTGGATATCATTTAGATCTGTTAAGAACTCTTTATGTACCTTCAGTTGCTAGAAACCTTATTCCCTTATCTAGATTAGATGTTTCTGGATTTAAAGTTACTTTTGGACATGGTTGTTTCAATTTGTTTAAAGACAGTTCTTGTATTGGATTTGGTATTCTTTCTAATGAAAAATCTCAAGCAGTGAATGCCCTCGAGGTATATGTAACCGAGGTTGAAAGGAAATTAGACAAAAAAGTGAAAATTGTAAGATCTGATAGAGGTGGTGAATTTTATGGAAAATATGATGAGTCAGGTCAATGTCCCGGTCCATTTGCAAAATTCCTTGAAAAACATGGCGTTCATAGTAAGGCAATTCCAAAGACTCCTTTTGAACTGTGGACTGAGAAATCTAAAGGGTATAGGTTTTATTGTCCAAACCATAGTCCAAGGATTGTGGAAATTGGAAATGCTAAATTCATAGAGAATGGTGAGGTTAGTGGGAGTACTGAAAGAAATGATGTGACTATAAAGGAAGTCAGGGTAGACATTTCTCTTCCTGTAAGCACTCCTTTATTAACATCAACTTCAAATGTTGTTCCAGTGACTGAAGCTAACACTGGACAAAATTTGAATGAAGAAACACTTCCAAAAGGAACTAACTCACAAGTATCTGACACAAATGAACCACAAGTACCATTAAGAACATATGAAAGACAAAAGAGATATGCTATTTCGGATGACTATGTGGTAGATATGCAGCAAGAGAGTTGGTTATTTGAAGGGGAAGCTCCAAAGAACATGGGATCAATGAACTCAAGCAATTGGCTCTCCTTCCCTCTTTCCCCAACCACTAATTCTCCATTACCAACCTCAAATCTCCAACCCACATCTCACCAATATCCCTACTTTTCTCTTGGGCTACTCAATGATGATAACACCCAAATCCCATTCCAAAACCATGATCATTGGAGTGTGATGAATACTCACAGTCACAAGGTTGAAGATTTTCTTGGTGTGAGCAAGGCAGAAGATGACAGTAATAATAATGAGTCAGATCTTGCAGCTTTTAACATTAACATTGAAGTTCAGCCAAATAATGATTCTGATCATTATCATCTATTCACATCTAGCAATCACAATAACGAGTATCAAATTCAAGAACAAGGTATTATTGTTGGTAATAATAATAGCAATAATAATTTTGAGTCATTGACGTTGTCCATGGGAAGTGGTAGTGGAAATAAGGATTCAAGTGTTATTTGTGAAGGCAGTGAAAACAATAGTGtatccaataataataatattgttgatATTGTGGCACCAAGAAGAAATTTGGATACCTTTGGGCAGAGAACATCCATATATCGTGGGGTTACAAGGTATGAAGCTCATCTTTGGGATAATAGCTGTAGGAGGGAAGGGCAATCAAGGAAAGGTCGCCAAGGTGGGTATGACAAAGAAGACAAAGCTGCTAGGGCCTATGATTTAGCTGCACTGAAGTACTGGGGAACATCCACCACTACAAACTTTCCAATAACCAACTACGAGACTGAATTAGAAGATATGAAGCACAAGACTAGGCAAGAATTCGTGGCAGCAATAAGGAGGAAGAGTAGTGGGTTCTCTAGGGGTGCCTCCATGTATAGGGGTGTAACAAgACATCATCAACATGGGAGATGGCAAGCAAGGATTGGGAGAGTGGCAGGAAACAAGGATCTTTACTTGGGGACTTTCAGCACAGAGGAAGAAGCAGCAGAAGCGTATGACATTGCAGCCATAAAGTTCAGAGGTGTGAACGCAGTAACAAACTTCGAGATGAACCGTTACGACGTGAATGCCATTCTGGAAAGCACCAGTCTACCCATAGGAGGAGGAAGTGTAGCCAAACGCCTGAAGGaggcccaagcccaagcccaggcCCAGGCTCTAGAATGTTCTAGAAATCGACAAGAAATGGTTTCACTCATGACGCACCCTCCTCACACTCTCCCTCTCAACTTTGATCATCAATATCTACTACAAAACTACGACAGTAGTAATAATGCTCCATTGTTCTACAACACCTACCTTCAGAATCAGAATGTTAATAACGAGGGGCTTATGATGAACTTGGGGGGTGGttattattcttcttcttcgtcgtcTTCGTCGTCATCATCCTCAACTGTGATGGACAGTGGTAATCGTGGTAGTGGTGGCGGTGGGATCGCGGGATTGATAGGGATGTCCGATGCGGCGTACGCCGGGTGGTCGGGGCCCGCGGCTGCGGCGGTGGAGGAGTGTAATGATGGAGGTGTGTTTAGCATGTGGAATTCTAACTga 3051 0.3946 MGTFQQIKPYVYANDYCQQLKTTIPQTENAKEYLKFVEERFRTADKSLAARLRSLGMTVEDSFIVQFILNSLPPKYGPFQINYNTIKDKWDINELASKLVQEEMRLKKHVSHSVNLIGQGAGKALKPKANKFKTGKTPVNAPNVERKDQKASKCHFCGKDGHFQKDCLKGKAWFEKKGKPSALLCYEPNLAEFSYNTWWLDSGATTHVCNMMQGFLTIQTINRNESFLSMGNRMKVSVEGIGTYRLVLDTGYHLDLLRTLYVPSVARNLIPLSRLDVSGFKVTFGHGCFNLFKDSSCIGFGILSNEKSQAVNALEVYVTEVERKLDKKVKIVRSDRGGEFYGKYDESGQCPGPFAKFLEKHGVHSKAIPKTPFELWTEKSKGYRFYCPNHSPRIVEIGNAKFIENGEVSGSTERNDVTIKEVRVDISLPVSTPLLTSTSNVVPVTEANTGQNLNEETLPKGTNSQVSDTNEPQVPLRTYERQKRYAISDDYVVDMQQESWLFEGEAPKNMGSMNSSNWLSFPLSPTTNSPLPTSNLQPTSHQYPYFSLGLLNDDNTQIPFQNHDHWSVMNTHSHKVEDFLGVSKAEDDSNNNESDLAAFNINIEVQPNNDSDHYHLFTSSNHNNEYQIQEQGIIVGNNNSNNNFESLTLSMGSGSGNKDSSVICEGSENNSVSNNNNIVDIVAPRRNLDTFGQRTSIYRGVTRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPITNYETELEDMKHKTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGVNAVTNFEMNRYDVNAILESTSLPIGGGSVAKRLKEAQAQAQAQALECSRNRQEMVSLMTHPPHTLPLNFDHQYLLQNYDSSNNAPLFYNTYLQNQNVNNEGLMMNLGGGYYSSSSSSSSSSSSTVMDSGNRGSGGGGIAGLIGMSDAAYAGWSGPAAAAVEECNDGGVFSMWNSN 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1741 1016 ProSiteProfiles AP2/ERF domain profile. 697 754 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 Coils Coil 874 894 - -
Sto7g1741 1016 CDD AP2 696 756 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 Pfam AP2 domain 791 840 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 SMART rav1_2 790 854 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 SMART rav1_2 697 760 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 SUPERFAMILY DNA-binding domain 696 755 IPR016177 GO:0003677
Sto7g1741 1016 MobiDBLite consensus disorder prediction 449 473 - -
Sto7g1741 1016 ProSiteProfiles AP2/ERF domain profile. 790 848 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 517 922 - -
Sto7g1741 1016 Gene3D AP2/ERF domain 790 850 IPR036955 GO:0003700|GO:0006355
Sto7g1741 1016 Gene3D AP2/ERF domain 697 756 IPR036955 GO:0003700|GO:0006355
Sto7g1741 1016 SUPERFAMILY DNA-binding domain 789 849 IPR016177 GO:0003677
Sto7g1741 1016 Pfam gag-polypeptide of LTR copia-type 47 108 - -
Sto7g1741 1016 CDD AP2 789 848 IPR001471 GO:0003700|GO:0006355
Sto7g1741 1016 ProSiteProfiles Zinc finger CCHC-type profile. 153 167 IPR001878 GO:0003676|GO:0008270
Sto7g1741 1016 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 517 922 - -
Sto7g1741 1016 SUPERFAMILY Retrovirus zinc finger-like domains 137 173 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1741 Sto-Chr7 22875089 22888915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1741 513 1014 AP2-EREBP Transcription Factor Family AT1G51190 49.094 2.78e-149 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sto7g1741 Retrotran_gag_2 1.2e-07 CL0523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1741 K09285 - nau:109221034 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1741 7 22875089 22888915 Sto7g1741 7 22875089 22888915 ECH