Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1516 ATGGAGTTCGAGGATGACATGCACGACGCCAACGATGTTGAGTCCCTCGATGACGATTTCTACAACGGTGAGACTGAGGATGCTCCCATGGATTACTACAGCGACTATGATGATAAGGCCGATGATTACTTTGATGATGTTGATGATTCCGATAGGATTGTGTCCCGTCGCCCCGAGCAAAACTTTATCATCTTGACCGAACCAGATATTCGGCAAAGACAAGAAGATGACATCACTAGAGTATCAACAGTTCTTTCTATATCACGAGTTGCTGCAAGCATACTACTTCGTCACTACAATTGGAGCGTCAGCAATGTGCATGATGCATGGTTTGCTGATGAAGATCGAGTACGCAAAGCAGTTGGCTTGTTGGATAAGCCTGTTGTGCAGTTTCCTAATGCTAGAGAGCTGATATGCGGTATCTGTTTTGACGCTTATCCTCAGTCACGGATAGAAGCTGCTGCTTGTGGTCATCCTTATTGTATCTCATGCTGGGAAGcttttatttttctgcCATATCATGTTCTTCTGTCCTTTTATAAATGCTTGCTAAGATATATTAGCACATCCATTAATGATGGACTTGCATGTTTGATGCTGAGATGTCCTGATCCTACTTGTGGTTCTGCTGTCGGTCAAGATATGATTAATCTGTTAGCATCTGATGAAGACAAGGAGAAGTATGCACAATACCTTCTTAGGTCTTATATTGAGGATAATAAAAAGTGTCCTGCTCCAGGTTGTGAATATGTGGTTACTTTTGATGCTGGTGGTGGGAATTATGATGTTTCTTGCCTCTATTCATACAACTTTTGCTGGAATTGCACTGAGGAGGCACACCGTCCTGTTGACTGTGGCACTGTGGCAAAGTGGATTTTGAAGAACAGTACAGAATCTGAAAATATGAATTGGTAA 915 0.4186 MEFEDDMHDANDVESLDDDFYNGETEDAPMDYYSDYDDKADDYFDDVDDSDRIVSRRPEQNFIILTEPDIRQRQEDDITRVSTVLSISRVAASILLRHYNWSVSNVHDAWFADEDRVRKAVGLLDKPVVQFPNARELICGICFDAYPQSRIEAAACGHPYCISCWEAFIFLPYHVLLSFYKCLLRYISTSINDGLACLMLRCPDPTCGSAVGQDMINLLASDEDKEKYAQYLLRSYIEDNKKCPAPGCEYVVTFDAGGGNYDVSCLYSYNFCWNCTEEAHRPVDCGTVAKWILKNSTESENMNW 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1516 304 ProSiteProfiles TRIAD supradomain profile. 135 304 IPR044066 -
Sto7g1516 304 MobiDBLite consensus disorder prediction 1 25 - -
Sto7g1516 304 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 16 304 - -
Sto7g1516 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 172 IPR013083 -
Sto7g1516 304 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 178 239 IPR013083 -
Sto7g1516 304 Pfam IBR domain, a half RING-finger domain 226 285 IPR002867 -
Sto7g1516 304 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 16 304 IPR031127 GO:0004842|GO:0016567
Sto7g1516 304 MobiDBLite consensus disorder prediction 1 32 - -
Sto7g1516 304 SMART ibrneu5 226 285 IPR002867 -
Sto7g1516 304 SUPERFAMILY RING/U-box 180 238 - -
Sto7g1516 304 SUPERFAMILY RING/U-box 135 169 - -
Sto7g1516 304 SUPERFAMILY RING/U-box 227 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1516 Sto-Chr7 19657635 19659560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1516 17 304 ARIADNE family AT1G65430 58.863 1.37e-115 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1516 K11968 - gmx:100810427 466.077