Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1507 ATGAGCCGTGGCTTCAGGATGGTTTTCTGTTCAAGTGTGAAATCATCTGAGGGTGAGGCAGAATCCGGTTTAGAAAGACTTCATCAATGTGCCGAAAAGGAATTACAGCAGTACCTGAATGCTGATGGTCCATCTAGAGAATTCAATGACTTCCGCACTAAGCTAGCTGGATTAACTAGTGTGACTAGAAACTACTGTGAGAACTTGGTTAGGGCATTAGAGAATGGTCTATCTAATGTAGATAGTAATGGAGCTGCTTCCAGCAAAGCAACGAGCTCAAAAAATGGTGAAAGCAGCAGCAAGGGGAGAGGTGGAAGAGGAAAGGGAACTACTCGAACCAGTCGAATGACTGATGATAATATTTGGTCGTGTGAGCATTGTACTTATGGAAATCCCAAATCTTCCACCACATGCCAGATGTGCCATCAACAGCGTCGATGA 441 0.4422 MSRGFRMVFCSSVKSSEGEAESGLERLHQCAEKELQQYLNADGPSREFNDFRTKLAGLTSVTRNYCENLVRALENGLSNVDSNGAASSKATSSKNGESSSKGRGGRGKGTTRTSRMTDDNIWSCEHCTYGNPKSSTTCQMCHQQRR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1507 146 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 16 101 - -
Sto7g1507 146 MobiDBLite consensus disorder prediction 77 116 - -
Sto7g1507 146 ProSitePatterns Zinc finger RanBP2-type signature. 122 141 IPR001876 -
Sto7g1507 146 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 16 101 IPR031127 GO:0004842|GO:0016567
Sto7g1507 146 SUPERFAMILY Ran binding protein zinc finger-like 118 145 IPR036443 -
Sto7g1507 146 SMART zf_4 120 144 IPR001876 -
Sto7g1507 146 Gene3D - 115 146 - -
Sto7g1507 146 ProSiteProfiles Zinc finger RanBP2 type profile. 118 146 IPR001876 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1507 17 145 ARIADNE family AT1G65430 61.240 3.44e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1507 K11968 - gmx:100810427 196.438