Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1360 ATGGGAACTTTTGCATCAGTTGCCCCTGTCATTACACTTGGATCTATATCCAAGAGATGGATTGTTCCTGCTTGGAGATTGGGCTTCCAATTACTGATGATCCTAATGGCATCATTCAATGAGACGAGGTTTGATTTTGTGGTGGCCAAAGATGGCACAGGCAATTTCACCACCATTGGGGAACTAGTGGCTGCAGCTCCAAATTCCAGCACAATCAGGCACGGCAAGATAGTGATACACATAAAAGCAGGGGCGTACATGGAGAATGTGGAGGTAATGAGGAAGAACAGGAATTTGATGTTGGTTGGAGATGGAATTGGAAACACCATTGTCAAAGCAGGTCGGAATGTTATAGACGGATGGTCTACATTCCTTCAAATTCCAAAACTATTTAGTATGAATGGAGTTGGTGCTGTTAAAATTGAGAAAATGTTTGACATCTGTGTAATATGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCCTATGACCTTGCTGCTCTGAAATATTTGGGTCTAGGGACTCTCATTAATTTTCCAACCAAGGCTTTTAATAGGTTACCATTATGTTTTTATTGCTTGAGAAGCACATGA 594 0.4175 MGTFASVAPVITLGSISKRWIVPAWRLGFQLLMILMASFNETRFDFVVAKDGTGNFTTIGELVAAAPNSSTIRHGKIVIHIKAGAYMENVEVMRKNRNLMLVGDGIGNTIVKAGRNVIDGWSTFLQIPKLFSMNGVGAVKIEKMFDICVIWAYDDEEAAARAYDLAALKYLGLGTLINFPTKAFNRLPLCFYCLRST 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1360 197 Pfam Pectinesterase 45 125 IPR000070 GO:0030599|GO:0042545
Sto7g1360 197 ProSiteProfiles AP2/ERF domain profile. 102 180 IPR001471 GO:0003700|GO:0006355
Sto7g1360 197 SUPERFAMILY DNA-binding domain 152 181 IPR016177 GO:0003677
Sto7g1360 197 Gene3D AP2/ERF domain 150 182 IPR036955 GO:0003700|GO:0006355
Sto7g1360 197 PANTHER PECTINESTERASE 33 125 - -
Sto7g1360 197 PANTHER PECTINESTERASE 33 125 - -
Sto7g1360 197 Gene3D - 40 149 IPR012334 -
Sto7g1360 197 SUPERFAMILY Pectin lyase-like 44 127 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1360 Sto-Chr7 14889486 14891312 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1360 23 124 Carbohydrate Esterase AT4G02320 48.039 1.20e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1360 K01051 - jre:108989002 132.109