Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1351 ATGGTGCTCGCCGGAGAACGCCGTCGATGCTATGAACATCGCGCAAAAACGCAGGCGTCAAAGTCTATTTTCCATCTTTTGCGTTTGGTTCGATTTGCCCTAGACGTGGGAACTTTTGCATCAGTTGCCCCTGCCATTACACTTGGATCTATATCCAAGAGATGGATTGTTGCTGCTTGGAGATTGGGCTTCCAATTACTAATGATCCTAATGGCATCATTCAATGAGACGAGGTTTGATTTTGTGGTGGCCAAAGATGGCACAGGCAATTTCACCACCATTGGGGAAGCAGTGGCTGCAGCTCCAAATTCCAGCACAATCAGGCACGGCAAGATAGTGATACACATAAAAGCAAGGGCGTACATGGAGAATGTGGAGGTaatgaggaagaagaggaattTGATGCTGGTTGGAGATGGAATTGGAAACACCATTGTCAAAGCAGGTCGGAATGTTATAGACGGATGGACTACATTCCTTCAAATTCCAAAACTATTTAGTATGAATGGTATTCCAAAACTCATTATGTCTTTGtga 537 0.4302 MVLAGERRRCYEHRAKTQASKSIFHLLRLVRFALDVGTFASVAPAITLGSISKRWIVAAWRLGFQLLMILMASFNETRFDFVVAKDGTGNFTTIGEAVAAAPNSSTIRHGKIVIHIKARAYMENVEVMRKKRNLMLVGDGIGNTIVKAGRNVIDGWTTFLQIPKLFSMNGIPKLIMSL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1351 178 Pfam Pectinesterase 80 160 IPR000070 GO:0030599|GO:0042545
Sto7g1351 178 PANTHER PECTINESTERASE 18 160 - -
Sto7g1351 178 PANTHER PECTINESTERASE 18 160 - -
Sto7g1351 178 SUPERFAMILY Pectin lyase-like 79 160 IPR011050 -
Sto7g1351 178 Gene3D - 75 168 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1351 Sto-Chr7 13723494 13725450 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1351 69 159 Carbohydrate Esterase AT4G02320 52.747 3.14e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1351 K01051 - jre:108994228 133.265