Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1332 ATGGGAACTTTTGCATCAGTTGCCCTTGTCATTACACTTGGATCTATATCCAAGAGATGGATTGTTCCTGCTTGGAGATTGGGCTTCCAATTACTGATGATCCTAATGGCATCATTCAATGAGACGAGGATAGTGATACACATAAAAGCAGGGGCGTACATGGAGAATGTGGAGGTaatgaggaagaagaggaattTGATGTTGGTTGGAGATGGAATTGGAAACACCATTGTCAAAGCAGGTCGGAATGCTATAGACGGATGGTCTACATTCCTTCAAATTCCAAAACTATTTAGTATGAATGGGGCATATGATGATGAAGAGGCTGCAGCTAGAGCCTATGACCTTGCTGCTCTGAAATATTGGGGTCTAGGGACTCTCATTAATTTTCCAGTAAGATAA 402 0.4005 MGTFASVALVITLGSISKRWIVPAWRLGFQLLMILMASFNETRIVIHIKAGAYMENVEVMRKKRNLMLVGDGIGNTIVKAGRNAIDGWSTFLQIPKLFSMNGAYDDEEAAARAYDLAALKYWGLGTLINFPVR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1332 133 PANTHER PECTINESTERASE 37 92 - -
Sto7g1332 133 Pfam Pectinesterase 39 92 IPR000070 GO:0030599|GO:0042545
Sto7g1332 133 Gene3D - 35 113 IPR012334 -
Sto7g1332 133 SUPERFAMILY DNA-binding domain 98 132 IPR016177 GO:0003677
Sto7g1332 133 SUPERFAMILY Pectin lyase-like 40 92 IPR011050 -
Sto7g1332 133 ProSiteProfiles AP2/ERF domain profile. 53 131 IPR001471 GO:0003700|GO:0006355
Sto7g1332 133 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED 37 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1332 Sto-Chr7 12570357 12571637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1332 38 97 Carbohydrate Esterase AT4G02300 55.000 1.44e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1332 K01051 - mnt:21394393 86.2705