Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1326 ATGGGAACTTTTGCATCAGTTGCCCCTGTCATTACACTTGGATCTATATCCAAGAGATGGATTGTTCCTGCTTGGAGATTGGGCTTCCAATTACTAATGATCCTAATGGCATCATTCAATGAGACGAGGTTTGATTTTGTGGTTGCCAAAGATGGCACAGGCAATTTCACCACCATTGGGGAAGCAGTGGCTGCAGCTCCAAATTCCAGCACAACCAGGCACGGCAAGATAGTGATACACATAAAAGCAGGGGCGTACATGGAGAATGTGGAGGTaatgaggaagaagaggaattTGATGCTGGTTGGAGATGGAATTGGAAACACCATTGTCAAAGCAGGAGTTGGTGCTGTTAAAATTGAGAAAATGTTTGACATCTGTGTAATATGGGCATATGATGATGAAGAGGCTGCAACTAGAGCCTATGACCTTGCTGCTCTGAAATATTGGGGTCTAGGGACTCTCATTAATTTTCCAACCAAGGTTTTTAATAGGTTACCATTATGTTTTTATTGCTTGAGAAGCACATGA 531 0.4124 MGTFASVAPVITLGSISKRWIVPAWRLGFQLLMILMASFNETRFDFVVAKDGTGNFTTIGEAVAAAPNSSTTRHGKIVIHIKAGAYMENVEVMRKKRNLMLVGDGIGNTIVKAGVGAVKIEKMFDICVIWAYDDEEAATRAYDLAALKYWGLGTLINFPTKVFNRLPLCFYCLRST 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1326 176 PANTHER PECTINESTERASE 33 113 - -
Sto7g1326 176 PANTHER PECTINESTERASE 33 113 - -
Sto7g1326 176 SUPERFAMILY Pectin lyase-like 44 124 IPR011050 -
Sto7g1326 176 Pfam Pectinesterase 45 123 IPR000070 GO:0030599|GO:0042545
Sto7g1326 176 Gene3D - 40 147 IPR012334 -
Sto7g1326 176 SUPERFAMILY DNA-binding domain 131 160 IPR016177 GO:0003677
Sto7g1326 176 ProSiteProfiles AP2/ERF domain profile. 86 159 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1326 Sto-Chr7 12263929 12265733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1326 23 114 Carbohydrate Esterase AT4G02320 51.087 1.54e-23 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1326 K01051 - jre:108989002 118.242