Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1244 atggaaagaTCAGAGGTGAATAATATGGATGAAGATGTATCAAATGCCTTAGAATTGGCAAGTATACAAAAGATACTCCTCTTCAAATCAGGAGCTAACTCCAAGCCAAAAGCTTATACAAAATTGCATAATGAAATGAAAGCAACTCTAATAGAAAGACTCCGAAACTGCCCTAGTTTGTTTCAGATGGGAGAGGAGGCGAAGATGAGCGACTATGAAGGCGATGCGGTCGATGATGAGCGAATCCTCGAGTGGGAGATGGGTCTCCCAAGCGCTGACGATCTCACTTCTCTGTCTTACTCCTTAATCCCGCCGGAGCTCGCTTCTGCCTTCAGTATCTCCCCGGCGCCTGGTCGGACACTTGTCGACGTCAATCGCGCCTCTCAAAACACTATCTCCAATCTTCGCAGCGGGAATTCTCAGGCCTTCTCATCCAACAATTTTAATTCCTTCAACGATGAACAGAGTCCGAACTCGGTCGTGGTGGAAGCAGATGATCGAGACGGGTCAGGATCTGATTCTAGGAAACTGAGGAAGATCAATTGTACGGAAGAAGTGGATTCGGCTTTGCGTACAAAGAATTTGGCGGGGGAGGATTCGTCATCGGCGAAGGCCTTGAAACGGCCTCGGCTAGTGTGGACTCCGCAGTTACACAGGCGTTTTGTGGATGTGGTGGCTCATCTAGGAATCAAGAACGCGGTGCCCAAGACAATTATGCAATTGATGAATGTTGAGGGATTGACCCGTGAGAATGTTGCTAGCCATCTGCAGAAGTATCGGCTCTACCTAAAGAGGATGCAGGGCCTGTCCAACGAGGGTCCCTCGTCGTCGGACCAGCTTTTGGCATCCACACCAATACCTCAGAGCTTGAACGAGTCTAGCGAAAGTGGACATTCGCATGGAAATGGACATCAAGGGGTTCCGATTCCAATGCCATATCCATCGTCTGTGATGCCAATGCCGGTGGGAATGCCATATCCACACTCTTATGGTCACCCGCATGCTCACATGGGAATGCATATGCTTAATCATGGCTTCAACTCCCATCCTTATAACGTAGTGTAG 1065 0.4845 MERSEVNNMDEDVSNALELASIQKILLFKSGANSKPKAYTKLHNEMKATLIERLRNCPSLFQMGEEAKMSDYEGDAVDDERILEWEMGLPSADDLTSLSYSLIPPELASAFSISPAPGRTLVDVNRASQNTISNLRSGNSQAFSSNNFNSFNDEQSPNSVVVEADDRDGSGSDSRKLRKINCTEEVDSALRTKNLAGEDSSSAKALKRPRLVWTPQLHRRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLLASTPIPQSLNESSESGHSHGNGHQGVPIPMPYPSSVMPMPVGMPYPHSYGHPHAHMGMHMLNHGFNSHPYNVV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1244 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 213 264 IPR017930 -
Sto7g1244 354 SUPERFAMILY Homeodomain-like 206 265 IPR009057 -
Sto7g1244 354 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 261 IPR006447 GO:0003677
Sto7g1244 354 Gene3D - 205 267 - -
Sto7g1244 354 MobiDBLite consensus disorder prediction 144 175 - -
Sto7g1244 354 MobiDBLite consensus disorder prediction 144 159 - -
Sto7g1244 354 MobiDBLite consensus disorder prediction 270 312 - -
Sto7g1244 354 MobiDBLite consensus disorder prediction 270 301 - -
Sto7g1244 354 Pfam Myb-like DNA-binding domain 212 260 IPR001005 -
Sto7g1244 354 PANTHER TRANSCRIPTION FACTOR LUX 63 353 - -
Sto7g1244 354 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 63 353 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1244 Sto-Chr7 10696510 10698173 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1244 63 352 G2-like Transcription Factor Family AT3G46640 54.662 8.36e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sto7g1244 Myb_DNA-binding 5.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1244 - - cpep:111787368 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1244 7 10696510 10698173 Sto7g1244 7 10696510 10698173 ECH