Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1215 ATGGCACAACTAGGGCAGGGCACCATGGACCCTGCCGTTCTAGACGACATTATCAATCGGCTTTTGGTGTTTCGTCACGCGAAACCTGGCAAACAGGTTCAGCTCATGGAGGCCGAGATCCGTCAGCTTTGTATTGTTTCCAGAGATATCTTCCTCCGACAACCCGTTCTTCTTGAGATCCGAGCACCGATCAAGATTTGCGGTGACATACATGGACAATATTCTGACCTATTGAGGCTATTTGAATATGGGGGTTTTCCCCCAACTGCTAATTATTTATTCCTAGGGGACTATGTGGACCGTGGGAAGCAGAGTTTGGAAACAATATGCCTCTTACTTGCTTACAAGATCAAATACCCAGAGAAGTTCTTTATTCTAAGAGGCAATCATGAATGTGCTTCAATCAATCGTATATACGGATTCTATGATGAATGTAAGCGCCGTTTCAATGTGAGATTGTGGAAGACTTTCACTGATTGTTTTAATTGTCTTCCTGTTGCTGGGCTCATAGATGAGAAAATACTATGCATGCATGGGGGCCTTTCCCCTGATTTAACAAATTTAgatgaaattagaaacctacCTCGTCCAACTGATGTCCCTGATTCTGGTTTGCTTTGTGATTTACTTTGGGCGGACCCTGGTAAAGAAGTGAAGGGTTGGGCAACGAGTGATCGCGGGGTGTCACACACGTTTGGTGCAGACAAGGTTTCTGAATTCTTAATGAAGAATGACATGGATCTAATTTGTCGTGCTCATCAGGTTGTTGAGGATGGATATGAATTCTTTGCTGACCGACAGCTTGTCACTTTATTCTCTGCTCCCAATTATTGTGGTGAATTTGATAATGCAGATTCATTTGAGAGGGTGATGACTGATGAGGATGCCATTCTTAATTATCCTTCAGTAACTCTATTGTGTGTTAGCGGGAGAGCACTTCAAGAATACAATGGTCGTATACCAGAACCTGCTTTGCAGAGACGACAAGTCAATCTGTTTGAAGATGTGAGTGATGAGTTACATGCTTAA 1029 0.4247 MAQLGQGTMDPAVLDDIINRLLVFRHAKPGKQVQLMEAEIRQLCIVSRDIFLRQPVLLEIRAPIKICGDIHGQYSDLLRLFEYGGFPPTANYLFLGDYVDRGKQSLETICLLLAYKIKYPEKFFILRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAGLIDEKILCMHGGLSPDLTNLDEIRNLPRPTDVPDSGLLCDLLWADPGKEVKGWATSDRGVSHTFGADKVSEFLMKNDMDLICRAHQVVEDGYEFFADRQLVTLFSAPNYCGEFDNADSFERVMTDEDAILNYPSVTLLCVSGRALQEYNGRIPEPALQRRQVNLFEDVSDELHA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1215 342 CDD MPP_PP1_PPKL 13 293 - -
Sto7g1215 342 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Sto7g1215 342 Pfam Serine-threonine protein phosphatase N-terminal domain 14 60 IPR031675 -
Sto7g1215 342 SMART pp2a_7 35 305 IPR006186 GO:0016787
Sto7g1215 342 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Sto7g1215 342 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Sto7g1215 342 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 2 5 289 - -
Sto7g1215 342 Gene3D - 7 300 IPR029052 -
Sto7g1215 342 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 5 289 - -
Sto7g1215 342 SUPERFAMILY Metallo-dependent phosphatases 30 284 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1215 Sto-Chr7 10344262 10348439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1215 64 248 Calmodulin-binding Proteins AT5G63870 31.818 4.02e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1215 K06269 - zju:107410912 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1215 7 10344262 10348439 Sto7g1215 7 10344262 10348439 ECH