Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1206 ATGACTGTGCAAGAGGGGGCCATGGCAGTGGCAAAGACGACGCCTTGGGAGGAGGAAGCTCGAGGAGATGCAAGATCGAAGGAATACGCGTTATACTTTGCTAATTTTGGATTCATGGATCCAAACTTGTCTGGAACCCATGATTTCACGAACGGATTCAAAATAGACGATGGTATTGTCCTCTCTGATCCAAATCAGTATCAGAATCTAGGAAATCACTGGGATCTCGACGAAATTTATACTGGGAGCTTTGTTAATTACTCCGGCGATCTTTCTTATCAACATGAGGTGGACCCTGTTCGTTTTGCTTCACAGACAAGCGTGTATTCTGAAGGAGCACGGCTGAATCCATCCTGGAGTACTGCGAATCCTGTAGAAGAGGTGCCAGATTTCTCATCTGGAACCTTGACTTCGGAGGCCGATCCTTCACTGGATGACACTGACTTTTCAGAAACCGCCAAGTACATAAGCCAGATGCTTATGGAAGAGAACTTTGAACAGAAGCCATGCATGTTTTATGATCCCCTCAGTTTAAAACTTACTGAGAAATCATTTTATGACGCTATTGGAGAGAACTGTCCTCTCTCCCCTAACCAACACCCCCTCTTTGACAATGATGAGAGCCCAGATGGTCATTATTCTGGAACAACTAGTACTGATTCTGGTAGTTCTAGCACTAGCACAAGCACCAACACCTCAGTGGAGTTAAGGACCCCTTCACCGGATACCCCTGCTTCTGGTGACTATGTTTTCCAGTTTACTTCACAACCCATTTCTCAAAAGCCCTTTCAACCTCCAAATGCTTTTACTAATGGACTGTTGGATTTTGATTCTTCTATTACTAAACTCTTGGCTCAAAATATCTTCAGTGACGCAGATTCTGTCTCTCAATTCAATCGAGGTTTAGAGGAAGCCAGAAAATTTCTTCCTAAAGTCACTGGTCTGGAGAGCAAACCCGTGTCTCTAGAGTCAAAAAGAGTGAGAGGAGAGGCAATAATCACTATGGGGAAAGATGTTAGGGATGGGTTAAAAAGTAGAAAGAATCATGAGCGTGAAGGTAGTGATGATGAAGAGGAAGGGAGAAGTAACAAGCAGTCAGCAGTGTATGTTGATGAGAGTGAAGAATTGTCAGAAATGTTTGATAAAGTGTTGCTTAGTGTTGAGAATGTTCCATTGTGTGCTGAGCACAACGGTATGCAGTGTGAACCGCTCAAAGACGTGCAGTCAAGTGAGCAGCCTGCAGATTCGTCTGATGGAGGAGGGAAGACTCGCTCTAAGAAACAAGGCAAGACGAAAGAAACCGTGGATTTGAGGACACTTTTGGTTTTATGTGCACAATCTGTGTCTGCAAATGATAGGAGGACAGCTAATGAATTACTAAAGCAGATAAGGCAGCATTCTTCTCCCTTCGGTGATGGGTCGCAGAGGGTGGCTCATTACTTCGCCAATGGGCTTGAGGCACGTTTGATTGGAGCTGGTGCTGGAACCCAACTATTTTATAACTCTCTGAGCTCCAAGAGGATCTCTGCTGCTGATATGCTGAAAGCTTACCAAGTTAGTATGACTGCCTCACCTTTCAAGAAGTTTGCAAATTTCTTCAATATCAAAATGATTATGAAAGCAGCTGAAAAGGCAGAAACCCTTCATATTGTCGATTTTGGTATCCTATATGGTTACCAATGGCCTATGCTTATTAAGTTTCTTTCAAGTAGAGATGGTGGACCTCCCAAGCTGCGCATCACAGGAATAGAATTTCCCCAACCCGGCTTTCGTCCAGCAGAAAGAATAGAGGAAACCGGTCGTCGTTTGGGTAACTATTGCAAACGATTCAGTGTTCCCTTTGAGTACAAAGCCATAGCGTCCCAAAACTGGGATACCATCAGCATTGAAGACCTTAAGGTTGAGAGGAATGAGGTACTTGCTGTGAACTGTTTGATGAGGTTTAAGAATTTACTGGACGAGACCATTGAAGTGAGCAGTCCTAGGAATGTAGTTCTGAATCTAATAAGGAAGATGAATCCTGATATTTTTGTTCAATCCATTTTAAATGGATCCTACAATGCCCCTTTCTTTGTCACTCGGTTCAGAGAGGCACTGTTCCATTTTTCTGCACTGTACGATATGTTCGATACTATGGTACCCCGCGAGAACGAATGGAGGTTGATGCTTGAGAGAGAGTTTTATGGTCGAGAAGCTATGAATGTTGTGGCATGTGAAGGTTTGGAGAGGGTTGAAAGGCCTGAGACATACAAGCAGTGGCAGGTAAGGGTTACAAGGGCTGGTTTCAAGCAGCTCCCATTGAACAAGGAGCTAATGGCCAAGTTCAGGAACAAGATGGAGGCATGGTACCACAAAGATTTTGTGTTTGATGAAGACAACAATTGGATGATTCAAGGCTGGAAGGGACGCATTTTGTATGCTTCCACTTGTTGGGTTCCAGCATGA 2445 0.4397 MTVQEGAMAVAKTTPWEEEARGDARSKEYALYFANFGFMDPNLSGTHDFTNGFKIDDGIVLSDPNQYQNLGNHWDLDEIYTGSFVNYSGDLSYQHEVDPVRFASQTSVYSEGARLNPSWSTANPVEEVPDFSSGTLTSEADPSLDDTDFSETAKYISQMLMEENFEQKPCMFYDPLSLKLTEKSFYDAIGENCPLSPNQHPLFDNDESPDGHYSGTTSTDSGSSSTSTSTNTSVELRTPSPDTPASGDYVFQFTSQPISQKPFQPPNAFTNGLLDFDSSITKLLAQNIFSDADSVSQFNRGLEEARKFLPKVTGLESKPVSLESKRVRGEAIITMGKDVRDGLKSRKNHEREGSDDEEEGRSNKQSAVYVDESEELSEMFDKVLLSVENVPLCAEHNGMQCEPLKDVQSSEQPADSSDGGGKTRSKKQGKTKETVDLRTLLVLCAQSVSANDRRTANELLKQIRQHSSPFGDGSQRVAHYFANGLEARLIGAGAGTQLFYNSLSSKRISAADMLKAYQVSMTASPFKKFANFFNIKMIMKAAEKAETLHIVDFGILYGYQWPMLIKFLSSRDGGPPKLRITGIEFPQPGFRPAERIEETGRRLGNYCKRFSVPFEYKAIASQNWDTISIEDLKVERNEVLAVNCLMRFKNLLDETIEVSSPRNVVLNLIRKMNPDIFVQSILNGSYNAPFFVTRFREALFHFSALYDMFDTMVPRENEWRLMLEREFYGREAMNVVACEGLERVERPETYKQWQVRVTRAGFKQLPLNKELMAKFRNKMEAWYHKDFVFDEDNNWMIQGWKGRILYASTCWVPA 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1206 814 MobiDBLite consensus disorder prediction 210 249 - -
Sto7g1206 814 MobiDBLite consensus disorder prediction 120 147 - -
Sto7g1206 814 MobiDBLite consensus disorder prediction 404 419 - -
Sto7g1206 814 Pfam GRAS domain family 437 811 IPR005202 -
Sto7g1206 814 MobiDBLite consensus disorder prediction 338 373 - -
Sto7g1206 814 MobiDBLite consensus disorder prediction 404 431 - -
Sto7g1206 814 PANTHER SCARECROW-LIKE PROTEIN 34 126 813 - -
Sto7g1206 814 ProSiteProfiles GRAS family profile. 428 812 IPR005202 -
Sto7g1206 814 MobiDBLite consensus disorder prediction 338 365 - -
Sto7g1206 814 MobiDBLite consensus disorder prediction 120 143 - -
Sto7g1206 814 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 126 813 IPR005202 -
Sto7g1206 814 MobiDBLite consensus disorder prediction 197 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1206 Sto-Chr7 10229668 10233602 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1206 154 814 GRAS Transcription Factor Family AT1G07530 52.211 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto7g1206 GRAS 6.3e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1206 - - adu:107461599 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1206 7 10229668 10233602 Sto12g0147 12 918194 920515 CCT
Sto12g0145 12 907742 909793 Sto7g1206 7 10229668 10233602 CCT
Sto7g1206 7 10229668 10233602 Sto7g1206 7 10229668 10233602 ECH
Sto12g0147 12 918194 920515 Sto7g1206 7 10229668 10233602 ECH