Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1202 ATGGATTCGCACTGTATCTCCAGTTTCGCCAACGGATTTGAATCCAACCAATATTCTGGCTCCGTAAATGGAATTGAAACCGTCGATCCATTCATGGTTACCAATTATCATGCCGGAAATCCTGCTTATTCTCAGTCTACCATTAGTACGGATGAAGACGAGAGTGACGACTATACTGTCCTGCGTTACATAAACCAAATGCTTATGGAAGAGGATATGGAGGAGAAGTCGTGTATGTTCCATGATTCCTTGGCTCTTCAAGCTGCTGAGGAGTCATTGTACGAGTCTCCTCCATTATCCGCAGCAGAAATTCCCAGGGACAATATGAGAAGCTCCAATAATGGCAATGGGTTCATGGGGGCTTACAGGACTGGCTTTCCAGATTCTACATCATCGTTAAAGAAGAATGTAGAGGTAGTAGTAACTAAAAAGGAGAGAGATGAGAGTTATTACATGCCaaaaggaagaaggaagaatCATGAGCGAGAATATGAGGTTGATTTAGAAGATGAAAGAAGCAATAAGCAGTCTGCAGTTTATGTGGAAGATGATGAAGGCACTGAGCAGCTATCAGCATTGTTTGATAAGATACTTATTGGACCAGCGTTGGGAAGAGAAAGACCTCTTGTATGTATCTTTGATAAACTTTACAATAGTCCTAATGGGTCAGACGTGAGTGTGAAGCCTGCGAAGGATGAAGAATTAGAGAAGTGTGGTGATCATAAAAAGAGTCGTGTGAGAAAGCAGAGCTATAAAAACAAAGTGGTGGATATAGAGACACTACTAATTCAATGTGCCCAGGCTGTTTCGACTGATAATCGTGTATCTGCTAATGAATTATTGAAGCAGATTAGGCAGCATTCTTCCTCAGTGGGGAGTGGATCTCAAAGGTTGGCCCATTGCTTTGCAAATGCTCTTGAAGCACGCCTGGCTGGCACTGGTACTCAAATCTACACTGCTTTATCCTCCAAGCGAACTTCTGCTGCTGATATGATAAAAGCTTACCAAATGTATATTACAGCTTGTCCATTCCAAAAGATGGCATTAATTCTTGCAAACCATACAATTCAGCATCTAGCTAGAGAGGAGGAACTGGAAACACTTCATATTATAGATTTTGGTATTCTTTATGGTTTCCAATGGCCTTCCCTTATCCATCGTCTCTCCATAAGACCTGGTAATCCCAAAAAGCTCCGCATCACTGGGATAGATCTCCCACAGCCTGGTTTCAGGCCAGCAGAGAGAGTCCAGGAGACTGGGCGTCGCCTCGCCAGGTATTGTAAGCGCTTCAATGTTCCATTTGAATATAATGGTATTGCACAGAAATGGGAAACCATCAAGGTTGAAGACCTGAAGATAAAGAAGAATGAATTTGTAGCTGTGAATTGTATGATTCGGTTTAAGAATCTGGTTGATGAGACAGTTTCAGTGAATAGTCCTAGAGATGCTGTTTTAAGGTTAATTAGGAAGGCAAAGCCCAATATATTTGTGCAGGGCATAGTTAATGGGTGCTATAATGCACCCTTCTTTGTGACACGGTTCCGCGAAGCTCTTTTCCATTACTCGTCATTGTTTGATGTGCTTGACACTACTGTTGATGCTGAAGATCCAATGAGGCTGATGTTTGAGAAGGAGTTCCTAGGGCGGGAGGTTATGAATATCATAGCTTGTGAGGGCACTGAGAGGGTTGAGAGGCCTGAGACATACAAGCAATGGCAGGTTCGGAACATGAAGGCTGGTTTTAGGCAGATACCTTTGGATCACCGTCTCATCCACGTCTTGAAGCATAAGTTGAGAAATGTGTATCACAGTGATTTCATGCTAGATGTAGATGGCAATTGGATGCTACAAGGATGGAAGGGTCGAATTGTCCGCGCTTCTTCTTGTTGGGTACCTTCATAG 1902 0.4253 MDSHCISSFANGFESNQYSGSVNGIETVDPFMVTNYHAGNPAYSQSTISTDEDESDDYTVLRYINQMLMEEDMEEKSCMFHDSLALQAAEESLYESPPLSAAEIPRDNMRSSNNGNGFMGAYRTGFPDSTSSLKKNVEVVVTKKERDESYYMPKGRRKNHEREYEVDLEDERSNKQSAVYVEDDEGTEQLSALFDKILIGPALGRERPLVCIFDKLYNSPNGSDVSVKPAKDEELEKCGDHKKSRVRKQSYKNKVVDIETLLIQCAQAVSTDNRVSANELLKQIRQHSSSVGSGSQRLAHCFANALEARLAGTGTQIYTALSSKRTSAADMIKAYQMYITACPFQKMALILANHTIQHLAREEELETLHIIDFGILYGFQWPSLIHRLSIRPGNPKKLRITGIDLPQPGFRPAERVQETGRRLARYCKRFNVPFEYNGIAQKWETIKVEDLKIKKNEFVAVNCMIRFKNLVDETVSVNSPRDAVLRLIRKAKPNIFVQGIVNGCYNAPFFVTRFREALFHYSSLFDVLDTTVDAEDPMRLMFEKEFLGREVMNIIACEGTERVERPETYKQWQVRNMKAGFRQIPLDHRLIHVLKHKLRNVYHSDFMLDVDGNWMLQGWKGRIVRASSCWVPS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1202 633 PANTHER SCARECROW-LIKE PROTEIN 14 41 106 - -
Sto7g1202 633 PANTHER SCARECROW-LIKE PROTEIN 14 135 632 - -
Sto7g1202 633 Pfam GRAS domain family 259 630 IPR005202 -
Sto7g1202 633 MobiDBLite consensus disorder prediction 152 171 - -
Sto7g1202 633 ProSiteProfiles GRAS family profile. 249 631 IPR005202 -
Sto7g1202 633 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 135 632 IPR005202 -
Sto7g1202 633 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 106 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1202 Sto-Chr7 10196904 10199141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1202 40 632 GRAS Transcription Factor Family AT2G29060 53.312 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sto7g1202 GRAS 7.5e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1202 - - ahf:112736647 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1202 7 10196904 10199141 Sto12g0149 12 926441 928867 CCT
Sto12g0147 12 918194 920515 Sto7g1202 7 10196904 10199141 CCT
Sto7g1202 7 10196904 10199141 Sto7g1202 7 10196904 10199141 ECH
Sto12g0149 12 926441 928867 Sto7g1202 7 10196904 10199141 ECH
Sto6g0625 6 6614620 6617084 Sto7g1202 7 10196904 10199141 ECH