Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1196 ATGGAGCTTGATGGGAAGCCTAAAGTGGGGATGGAATTTGATAACTTGGAGAGTGCTTGGAAATTTTTGAGGAGCTATGGTGGTAAAATGGGATTTGGGGTTAGGAAGGATTTTTTCAACAAGAGCAAAAAGGATGGTGCAATAACTTCTTGTCGATTTGTATGTTCTAAAGAAGGGGTAAGAAGAAAAGATAAGAGTGATTATTTAACCGTTAATCCTAGACAGGAGACGAGAACTGATTGCAAAGCAAGAATTGTGCTTCGCCGTGTGAATGAGAAATTGAGAGTGAAAGAATTTGTAGAGGAGCACCATCACAACTCGGCAAATCCCTTGTTCTTTCATAAATTTCAAATGGATTCAGATGAGCaaataacaaacatattttGGGCCGATGTAAGAATGCAACTAGACTATGCTTATTTTGGTGATGTTGTCTCTCTCGATACAACATACTGCACGAACAATGCACATAGGCCGCTTGCCttgttttcaggatttaatcATCACAGAGGAGTTGTTATTTTTGGGGCTGCATTGTTATATGATGAGACGGCAGCATCATTCAAGTGGTTATTTGAGATGTTCTTGAAGGTACATAATCAGAAAAAACCTCAAACCATCTTCACTGATCAAGACCGAGCAATGGCTAAAGGCCTACAAGAGGTGTTGCCTGACACATACCACAGATTATGCACATGGCATCTGATGCAGAATTGCATTAAGCACTTAGGCAACTTAATGAAGCATGGGTCTCATTTCTTACGAGACTTCAAGGCTTGTATGTATGAGTATGAGGAAGAGAAAGAGTTCGAAGAGGCTTGGAATGTTAAAAGGTGCTTGAATCCAGATGTTGATATTATTCAATTCTTTAAACACTTTGAACGAGTGCAACTTGCAGAAGTCTACACTCCTATCATTCTTGATATGTTCCAAGATCAATTTGACTTGTTTTCGGCTTGTTGTATAAAGCAAAGAAGGCAAATGTTTGAGGCCAACGATGTCAAGTTAGTTCCTGATCAATACATTTTGAAAAGGTGGACAAAGATGGCCAGAACAGGTATTATATTTGATGTCAATGGGAATGAGGTTGAGGAGGACCCAAAATTTGGTCATACGCTTGAAATTAGATCTCTTTGCCAACGTTTTGTCAAGCTAGCCTCCGAAGTCACGGGTAAAGATGAAGTCTTGATACTTCGTTCAGCTACGGATGAAGTGATCAAGAAAGTTGAGGCACTTCGTTTGGGGAAAATACATGGGACAAATGAGAGTGATGATCCTATAATACCTAGTAGCAATGACATGTCAATACCAACCGGCATCAAGAAGAGGGTTGGAATTAAAAGAAGGAGTCGTCCAAAGAGTAGGGTTGAGCTTCAACTTCGAAATAGAAAAGCTTCAAGGTCCAGATCACATCCAACTGTCACACATTCTCAAAGTGAATCCACAGATATTGGAGCTTCAAGTCAAGTGCAATTGGAGAATTCATTTAGTTTTACGAGATTGTTAATGGACCAAAGTGAAGGATCGGTCTCTCTTGGAGCATTAGAGTTTGGTGGTGACAAGTTATGA 1569 0.3926 MELDGKPKVGMEFDNLESAWKFLRSYGGKMGFGVRKDFFNKSKKDGAITSCRFVCSKEGVRRKDKSDYLTVNPRQETRTDCKARIVLRRVNEKLRVKEFVEEHHHNSANPLFFHKFQMDSDEQITNIFWADVRMQLDYAYFGDVVSLDTTYCTNNAHRPLALFSGFNHHRGVVIFGAALLYDETAASFKWLFEMFLKVHNQKKPQTIFTDQDRAMAKGLQEVLPDTYHRLCTWHLMQNCIKHLGNLMKHGSHFLRDFKACMYEYEEEKEFEEAWNVKRCLNPDVDIIQFFKHFERVQLAEVYTPIILDMFQDQFDLFSACCIKQRRQMFEANDVKLVPDQYILKRWTKMARTGIIFDVNGNEVEEDPKFGHTLEIRSLCQRFVKLASEVTGKDEVLILRSATDEVIKKVEALRLGKIHGTNESDDPIIPSSNDMSIPTGIKKRVGIKRRSRPKSRVELQLRNRKASRSRSHPTVTHSQSESTDIGASSQVQLENSFSFTRLLMDQSEGSVSLGALEFGGDKL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1196 522 Pfam FAR1 DNA-binding domain 22 106 IPR004330 -
Sto7g1196 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 3 110 IPR031052 GO:0006355
Sto7g1196 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 109 275 IPR031052 GO:0006355
Sto7g1196 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 327 412 IPR031052 GO:0006355
Sto7g1196 522 MobiDBLite consensus disorder prediction 444 488 - -
Sto7g1196 522 Pfam MULE transposase domain 144 238 IPR018289 -
Sto7g1196 522 MobiDBLite consensus disorder prediction 471 488 - -
Sto7g1196 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 3 110 - -
Sto7g1196 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 109 275 - -
Sto7g1196 522 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-LIKE 327 412 - -
Sto7g1196 522 MobiDBLite consensus disorder prediction 420 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1196 Sto-Chr7 10129097 10131455 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto7g1196 MULE 5e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1196 - - tss:122665771 356.295