Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto7g1183 ATGAAGTTGACACCCAATTTCTTGCCTAGTAAGCAGGCAAGCAAGGTTTGTTTCCATGGTTTACACCACTCTGCATATTCATCTTGCGTGACTATCAACTTAGGGCATGGGTCAAAGTTCTCATCATTCTGCAGCTCGTCTATGTGTTCCTCCTCATCTGAGTTTGTAAACAAGTCATCAACAAGGTCATCAACATCCTCCAGGGATGCGTCTCCTTCTCCCCCTCCCACCACAACATCATGGAACGATGCTTTTTCACATTCTTCGACAGGTCCATTCATCTGTGCTGCCGCCTCCTTCATCATTGATGAATTGCTCTCCTCTATGACACAGTCCATGGCAGATTCCTCATTCAACTCCTTGTTCATCCTAGACTTCTTCGCACTACAATCgctctcctccttctccttaCTTGGGTTGAATTCAAAGTTTGTGAGCAATGAGGGAAATGATATTAGCAGCAGCACAGGCAGTAAGGCATCGGCAGTGTCAGTGCCTCAGACTCCACGGAGTGAGGGAGAGATCTTGCAGGCATCCAATTTGAAGAGCTTCACTTTAGTAGAACTGAAGACAGCCACACGAAATTTTCGTCCGGATAGTGTGTTGGGAGAAGGTGGTTTTGGATTGGTGTATAAGGGATGGATCGACGAGCAATCCTTGGTTGCTAGCAAACCCGGCACTGGCATTGTTATTGCTGTTAAAAGACTTAATCAAGATGGTTTTCAAGGTCACAAGGAGTGGTTGgCTGAAGTGAACTATCTAGGACAGCTTTCTCATCCTCATCTTGTGAAATTAATTGGGTACTGCCTTGAAGACGAGCACCGCCTTTTGGTCTATGAGTTTATGCCTAGAGGCAGCTTGGAGAATCATTTGTTCAGAAGAGGCTCATATTTTCAACCTCTCTCATGGAGCCTCCGTATGAAGGTTGCTCTTGGTGCTGCCAAAGGGCTTGCATTTCTTCATAGTGCCGAAACAAAAGTGATATACCGGGATTTTAAGACTTCGAATGTCTTGCTGGATTCGAAATATAATGCAAAACTTTCTGATTTTGGGCTGGCAAAGGATGGACCAACAGGTGACAAGAGTCATGTCTCCActagggtaatgggaacttaTGGATATGCAGCTCCTGAATATCTAGCCACTGgtCACCTTACTGCTAAAAGCGATGTTTATAGTTTTGGAGTTGTGCTGCTCGAAATGTTATCCGGGCGGCGAGCAGTCGATAAGAATAGACCATCTGGTCAGCACAATTTGGTGGAATGGGCTAAACCCTATATGGCAAACAAACGAAAGATATTTCGGGTGGTTGACACCCGTCTTGAAGGCCAGTATTCATTAGACGAGGCTCATAAGGCAGCCATGCTTGCTTTGCGATGCCTATCGGTGGAGTCCAAGATAAGGCCGAACATGGACGAGGTTGTCACGGCATTGGAGCAGCTTCAAGCTCCTGTCAATGAAAATGGAAGCCATCAGTCGGCGAATCGGTCTCGTGCTCGAAGAAGAAGTGCTGATGATGCTAGTAGCAGGAGGGCCTCCATGGCTTACCCCAGGCCCTCTGCTTCTCCTCTCTATGCTTGA 1581 0.4535 MKLTPNFLPSKQASKVCFHGLHHSAYSSCVTINLGHGSKFSSFCSSSMCSSSSEFVNKSSTRSSTSSRDASPSPPPTTTSWNDAFSHSSTGPFICAAASFIIDELLSSMTQSMADSSFNSLFILDFFALQSLSSFSLLGLNSKFVSNEGNDISSSTGSKASAVSVPQTPRSEGEILQASNLKSFTLVELKTATRNFRPDSVLGEGGFGLVYKGWIDEQSLVASKPGTGIVIAVKRLNQDGFQGHKEWLAEVNYLGQLSHPHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRMKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSKYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTAKSDVYSFGVVLLEMLSGRRAVDKNRPSGQHNLVEWAKPYMANKRKIFRVVDTRLEGQYSLDEAHKAAMLALRCLSVESKIRPNMDEVVTALEQLQAPVNENGSHQSANRSRARRRSADDASSRRASMAYPRPSASPLYA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto7g1183 526 MobiDBLite consensus disorder prediction 59 82 - -
Sto7g1183 526 ProSitePatterns Protein kinases ATP-binding region signature. 202 234 IPR017441 GO:0005524
Sto7g1183 526 Gene3D Phosphorylase Kinase; domain 1 171 281 - -
Sto7g1183 526 PANTHER OS01G0588500 PROTEIN-RELATED 147 507 - -
Sto7g1183 526 Pfam Protein tyrosine and serine/threonine kinase 200 478 IPR001245 GO:0004672|GO:0006468
Sto7g1183 526 CDD STKc_IRAK 202 481 - -
Sto7g1183 526 Gene3D Transferase(Phosphotransferase) domain 1 282 507 - -
Sto7g1183 526 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 147 507 - -
Sto7g1183 526 MobiDBLite consensus disorder prediction 482 526 - -
Sto7g1183 526 ProSiteProfiles Protein kinase domain profile. 196 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto7g1183 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 327 339 IPR008271 GO:0004672|GO:0006468
Sto7g1183 526 SUPERFAMILY Protein kinase-like (PK-like) 170 478 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto7g1183 Sto-Chr7 9921477 9926520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto7g1183 182 478 Glycoside Hydrolase AT3G07070 53.020 3.00e-108 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sto7g1183 PK_Tyr_Ser-Thr 8.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto7g1183 - - gmx:100798404 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto7g1183 7 9921477 9926520 Sto12g0157 12 963891 965917 CCT
Sto7g1183 7 9921477 9926520 Sto7g1183 7 9921477 9926520 ECH